Data summary for DCD003393DT from sequencing run DCD000840SQ



DANIO-CODE_RNA-Seq_ver_1.0|STAR_2.5.1b: /STAR --alignSJoverhangMin 15 --genomeDir genome --readFilesIn RNA-seq_Mathavan_Lab_0001AS.DCD000840SQ.USERcwinata.R1.fastq --outSAMstrandField intronMotif --outFilterMatchNminOverLread 0 --outSAMattributes NH HI AS NM MD --outSAMunmapped Within --outFilterScoreMinOverLread 0.3 --outFileNamePrefix ~/outputs/ --genomeLoad NoSharedMemory --seedSearchStartLmax 12 --outWigStrand Stranded --outSAMtype BAM SortedByCoordinate --runThreadN 16 --outFilterMismatchNmax 33 --quantMode GeneCounts --outFilterType BySJout --outWigType bedGraph

freeze-01, freeze-02, freeze-03


March 25, 2017, 8:19 a.m.

Nov. 20, 2018, 7:10 a.m.

This data is part of series

  • DCD000170SR titled Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition