Data summary for DCD005757DT from sequencing run DCD002204SQ

LOG

GRCz10/danRer10

DANIO-CODE_RNA-Seq_ver_1.1|STAR_2.5.1b: /STAR --alignSJoverhangMin 15 --genomeDir genome --readFilesIn RNA-seq_Busch-Nentwich_Lab_0003AS.DCD002204SQ.USERdanio-user.R1.fastq RNA-seq_Busch-Nentwich_Lab_0003AS.DCD002204SQ.USERdanio-user.R2.fastq --outSAMstrandField intronMotif --outFilterMatchNminOverLread 0 --outSAMattributes NH HI AS NM MD --outSAMunmapped Within --outFilterScoreMinOverLread 0.3 --outFileNamePrefix ~/outputs/ --genomeLoad NoSharedMemory --seedSearchStartLmax 12 --outWigStrand Stranded --outSAMtype BAM SortedByCoordinate --runThreadN 16 --limitBAMsortRAM 91952393078 --outFilterMismatchNmax 33 --quantMode GeneCounts --outFilterType BySJout --outWigType bedGraph

freeze-01, freeze-02, freeze-03

danio-user

June 21, 2017, 12:41 p.m.

Nov. 27, 2018, 2:56 a.m.

This data is part of series

  • DCD000324SR titled Baseline expression from transcriptional profiling of zebrafish developmental stages