Series Summary for DCD000141SR

Nanog, Pou5f1 and SoxB1 activate zygotic gene expression during the maternal-to-zygotic transition.

Survey

10.1038/nature12632

GSE47558

Nanog, Pou5f1 and SoxB1 activate zygotic gene expression during the maternal-to-zygotic transition.

True

giraldezlab

May 6, 2016, 9:36 a.m.

Oct. 22, 2018, 9:22 p.m.

Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006183BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU 75%-epiboly 8
Applied Assay ID Biosample Replicate Assay
DCD000916AA DCD012279BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000747SQ DCD000856TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 04/26/2013
DCD000474DT: FASTQ
DCD002083DT: LOG GRCz10/danRer10
DCD002084DT: TSV GRCz10/danRer10
DCD002085DT: BEDGRAPH GRCz10/danRer10
DCD002086DT: BEDGRAPH GRCz10/danRer10
DCD002088DT: BEDGRAPH GRCz10/danRer10
DCD002089DT: BEDGRAPH GRCz10/danRer10
DCD002090DT: PDF GRCz10/danRer10
DCD002091DT: LOG GRCz10/danRer10
DCD002092DT: PDF GRCz10/danRer10
DCD002093DT: LOG GRCz10/danRer10
DCD002094DT: BEDGRAPH GRCz10/danRer10
DCD002100DT: BAM GRCz10/danRer10
DCD008658DT: BIGWIG GRCz10/danRer10
DCD008661DT: BIGWIG GRCz10/danRer10
DCD014784DT: LOG GRCz11/danRer11
DCD014785DT: BAM GRCz11/danRer11
DCD014786DT: TSV GRCz11/danRer11
DCD014787DT: TSV GRCz11/danRer11
DCD014788DT: BEDGRAPH GRCz11/danRer11
DCD014789DT: BEDGRAPH GRCz11/danRer11
DCD014790DT: BEDGRAPH GRCz11/danRer11
DCD014791DT: BIGWIG GRCz11/danRer11
DCD014792DT: BEDGRAPH GRCz11/danRer11
DCD014793DT: PDF GRCz11/danRer11
DCD014794DT: BIGWIG GRCz11/danRer11
DCD014795DT: LOG GRCz11/danRer11
DCD014796DT: PDF GRCz11/danRer11
DCD014797DT: LOG GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006185BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Shield 6
Applied Assay ID Biosample Replicate Assay
DCD000918AA DCD012281BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000806SQ DCD000858TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 04/26/2013
DCD000475DT: FASTQ
DCD002119DT: LOG GRCz10/danRer10
DCD002120DT: TSV GRCz10/danRer10
DCD002121DT: BEDGRAPH GRCz10/danRer10
DCD002123DT: BEDGRAPH GRCz10/danRer10
DCD002124DT: BEDGRAPH GRCz10/danRer10
DCD002125DT: BEDGRAPH GRCz10/danRer10
DCD002126DT: PDF GRCz10/danRer10
DCD002127DT: LOG GRCz10/danRer10
DCD002128DT: PDF GRCz10/danRer10
DCD002129DT: BEDGRAPH GRCz10/danRer10
DCD002130DT: LOG GRCz10/danRer10
DCD002135DT: BAM GRCz10/danRer10
DCD008650DT: BIGWIG GRCz10/danRer10
DCD008651DT: BIGWIG GRCz10/danRer10
DCD015092DT: LOG GRCz11/danRer11
DCD015093DT: TSV GRCz11/danRer11
DCD015094DT: TSV GRCz11/danRer11
DCD015095DT: BEDGRAPH GRCz11/danRer11
DCD015096DT: BAM GRCz11/danRer11
DCD015097DT: BEDGRAPH GRCz11/danRer11
DCD015098DT: BEDGRAPH GRCz11/danRer11
DCD015099DT: BEDGRAPH GRCz11/danRer11
DCD015100DT: LOG GRCz11/danRer11
DCD015101DT: PDF GRCz11/danRer11
DCD015102DT: BIGWIG GRCz11/danRer11
DCD015103DT: BIGWIG GRCz11/danRer11
DCD015105DT: LOG GRCz11/danRer11
DCD015106DT: PDF GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006196BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Shield 6
Applied Assay ID Biosample Replicate Assay
DCD000929AA DCD012292BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000700SQ DCD000869TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/20/2013
DCD000353DT: FASTQ
DCD002071DT: LOG GRCz10/danRer10
DCD002072DT: TSV GRCz10/danRer10
DCD002074DT: BEDGRAPH GRCz10/danRer10
DCD002075DT: BEDGRAPH GRCz10/danRer10
DCD002076DT: BEDGRAPH GRCz10/danRer10
DCD002077DT: BEDGRAPH GRCz10/danRer10
DCD002078DT: PDF GRCz10/danRer10
DCD002079DT: BEDGRAPH GRCz10/danRer10
DCD002080DT: LOG GRCz10/danRer10
DCD002081DT: PDF GRCz10/danRer10
DCD002082DT: LOG GRCz10/danRer10
DCD002087DT: BAM GRCz10/danRer10
DCD008648DT: BIGWIG GRCz10/danRer10
DCD008649DT: BIGWIG GRCz10/danRer10
DCD014503DT: LOG GRCz11/danRer11
DCD014504DT: TSV GRCz11/danRer11
DCD014505DT: TSV GRCz11/danRer11
DCD014506DT: BEDGRAPH GRCz11/danRer11
DCD014507DT: BAM GRCz11/danRer11
DCD014508DT: BIGWIG GRCz11/danRer11
DCD014509DT: BEDGRAPH GRCz11/danRer11
DCD014510DT: BEDGRAPH GRCz11/danRer11
DCD014511DT: BEDGRAPH GRCz11/danRer11
DCD014512DT: BIGWIG GRCz11/danRer11
DCD014513DT: LOG GRCz11/danRer11
DCD014514DT: LOG GRCz11/danRer11
DCD014515DT: PDF GRCz11/danRer11
DCD014516DT: PDF GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD000856AA DCD012303BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000791SQ DCD000880TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/20/2013
DCD000482DT: FASTQ
DCD002180DT: LOG GRCz10/danRer10
DCD002181DT: TSV GRCz10/danRer10
DCD002182DT: BEDGRAPH GRCz10/danRer10
DCD002183DT: BEDGRAPH GRCz10/danRer10
DCD002185DT: BEDGRAPH GRCz10/danRer10
DCD002186DT: PDF GRCz10/danRer10
DCD002187DT: BEDGRAPH GRCz10/danRer10
DCD002188DT: BEDGRAPH GRCz10/danRer10
DCD002189DT: LOG GRCz10/danRer10
DCD002190DT: PDF GRCz10/danRer10
DCD002191DT: LOG GRCz10/danRer10
DCD002195DT: BAM GRCz10/danRer10
DCD008642DT: BIGWIG GRCz10/danRer10
DCD008643DT: BIGWIG GRCz10/danRer10
DCD014978DT: LOG GRCz11/danRer11
DCD014980DT: TSV GRCz11/danRer11
DCD014981DT: TSV GRCz11/danRer11
DCD014982DT: BEDGRAPH GRCz11/danRer11
DCD014984DT: BAM GRCz11/danRer11
DCD014985DT: BEDGRAPH GRCz11/danRer11
DCD014986DT: PDF GRCz11/danRer11
DCD014987DT: BIGWIG GRCz11/danRer11
DCD014988DT: BIGWIG GRCz11/danRer11
DCD014989DT: BEDGRAPH GRCz11/danRer11
DCD014990DT: BEDGRAPH GRCz11/danRer11
DCD014991DT: LOG GRCz11/danRer11
DCD014992DT: LOG GRCz11/danRer11
DCD014994DT: PDF GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006197BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Sphere 4
Applied Assay ID Biosample Replicate Assay
DCD000930AA DCD012293BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000737SQ DCD000870TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/20/2013
DCD000354DT: FASTQ
DCD002131DT: LOG GRCz10/danRer10
DCD002132DT: TSV GRCz10/danRer10
DCD002133DT: BEDGRAPH GRCz10/danRer10
DCD002134DT: BEDGRAPH GRCz10/danRer10
DCD002136DT: BEDGRAPH GRCz10/danRer10
DCD002137DT: BEDGRAPH GRCz10/danRer10
DCD002138DT: BEDGRAPH GRCz10/danRer10
DCD002139DT: PDF GRCz10/danRer10
DCD002141DT: LOG GRCz10/danRer10
DCD002142DT: PDF GRCz10/danRer10
DCD002143DT: LOG GRCz10/danRer10
DCD002147DT: BAM GRCz10/danRer10
DCD008654DT: BIGWIG GRCz10/danRer10
DCD008655DT: BIGWIG GRCz10/danRer10
DCD014714DT: LOG GRCz11/danRer11
DCD014715DT: TSV GRCz11/danRer11
DCD014716DT: TSV GRCz11/danRer11
DCD014717DT: BEDGRAPH GRCz11/danRer11
DCD014718DT: BAM GRCz11/danRer11
DCD014719DT: BIGWIG GRCz11/danRer11
DCD014720DT: BIGWIG GRCz11/danRer11
DCD014721DT: BEDGRAPH GRCz11/danRer11
DCD014722DT: BEDGRAPH GRCz11/danRer11
DCD014723DT: BEDGRAPH GRCz11/danRer11
DCD014724DT: PDF GRCz11/danRer11
DCD014725DT: LOG GRCz11/danRer11
DCD014726DT: LOG GRCz11/danRer11
DCD014727DT: PDF GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006201BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Shield 6
Applied Assay ID Biosample Replicate Assay
DCD000850AA DCD012297BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000711SQ DCD000874TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/27/2013
DCD000483DT: FASTQ
DCD003333DT: LOG GRCz10/danRer10
DCD003334DT: TSV GRCz10/danRer10
DCD003335DT: BEDGRAPH GRCz10/danRer10
DCD003336DT: BEDGRAPH GRCz10/danRer10
DCD003337DT: BEDGRAPH GRCz10/danRer10
DCD003338DT: BEDGRAPH GRCz10/danRer10
DCD003339DT: BAM GRCz10/danRer10
DCD003340DT: LOG GRCz10/danRer10
DCD003341DT: PDF GRCz10/danRer10
DCD003343DT: BEDGRAPH GRCz10/danRer10
DCD003344DT: LOG GRCz10/danRer10
DCD003345DT: PDF GRCz10/danRer10
DCD008640DT: BIGWIG GRCz10/danRer10
DCD008641DT: BIGWIG GRCz10/danRer10
DCD014557DT: LOG GRCz11/danRer11
DCD014561DT: TSV GRCz11/danRer11
DCD014562DT: BAM GRCz11/danRer11
DCD014563DT: TSV GRCz11/danRer11
DCD014564DT: BIGWIG GRCz11/danRer11
DCD014565DT: BEDGRAPH GRCz11/danRer11
DCD014566DT: BEDGRAPH GRCz11/danRer11
DCD014567DT: BEDGRAPH GRCz11/danRer11
DCD014568DT: BEDGRAPH GRCz11/danRer11
DCD014569DT: LOG GRCz11/danRer11
DCD014570DT: LOG GRCz11/danRer11
DCD014571DT: PDF GRCz11/danRer11
DCD014572DT: PDF GRCz11/danRer11
DCD014573DT: BIGWIG GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000798SQ DCD000874TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/20/2013
DCD000485DT: FASTQ
DCD002144DT: LOG GRCz10/danRer10
DCD002145DT: TSV GRCz10/danRer10
DCD002146DT: BEDGRAPH GRCz10/danRer10
DCD002148DT: BEDGRAPH GRCz10/danRer10
DCD002149DT: BEDGRAPH GRCz10/danRer10
DCD002150DT: BEDGRAPH GRCz10/danRer10
DCD002151DT: PDF GRCz10/danRer10
DCD002152DT: LOG GRCz10/danRer10
DCD002153DT: BEDGRAPH GRCz10/danRer10
DCD002154DT: LOG GRCz10/danRer10
DCD002155DT: PDF GRCz10/danRer10
DCD002159DT: BAM GRCz10/danRer10
DCD008637DT: BIGWIG GRCz10/danRer10
DCD008639DT: BIGWIG GRCz10/danRer10
DCD015022DT: LOG GRCz11/danRer11
DCD015023DT: TSV GRCz11/danRer11
DCD015024DT: TSV GRCz11/danRer11
DCD015025DT: BAM GRCz11/danRer11
DCD015026DT: BEDGRAPH GRCz11/danRer11
DCD015027DT: BIGWIG GRCz11/danRer11
DCD015028DT: BEDGRAPH GRCz11/danRer11
DCD015029DT: BEDGRAPH GRCz11/danRer11
DCD015030DT: BEDGRAPH GRCz11/danRer11
DCD015031DT: BIGWIG GRCz11/danRer11
DCD015032DT: PDF GRCz11/danRer11
DCD015033DT: LOG GRCz11/danRer11
DCD015034DT: PDF GRCz11/danRer11
DCD015035DT: LOG GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000801SQ DCD000874TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/27/2013
DCD000484DT: FASTQ
DCD003092DT: LOG GRCz10/danRer10
DCD003093DT: TSV GRCz10/danRer10
DCD003095DT: BEDGRAPH GRCz10/danRer10
DCD003096DT: BEDGRAPH GRCz10/danRer10
DCD003097DT: BEDGRAPH GRCz10/danRer10
DCD003098DT: BEDGRAPH GRCz10/danRer10
DCD003099DT: PDF GRCz10/danRer10
DCD003100DT: BEDGRAPH GRCz10/danRer10
DCD003101DT: LOG GRCz10/danRer10
DCD003102DT: BAM GRCz10/danRer10
DCD003103DT: LOG GRCz10/danRer10
DCD003104DT: PDF GRCz10/danRer10
DCD008635DT: BIGWIG GRCz10/danRer10
DCD008636DT: BIGWIG GRCz10/danRer10
DCD015049DT: LOG GRCz11/danRer11
DCD015051DT: TSV GRCz11/danRer11
DCD015052DT: TSV GRCz11/danRer11
DCD015053DT: BAM GRCz11/danRer11
DCD015054DT: BEDGRAPH GRCz11/danRer11
DCD015055DT: BEDGRAPH GRCz11/danRer11
DCD015056DT: BEDGRAPH GRCz11/danRer11
DCD015057DT: BIGWIG GRCz11/danRer11
DCD015058DT: BEDGRAPH GRCz11/danRer11
DCD015059DT: BIGWIG GRCz11/danRer11
DCD015060DT: PDF GRCz11/danRer11
DCD015061DT: LOG GRCz11/danRer11
DCD015062DT: PDF GRCz11/danRer11
DCD015063DT: LOG GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006202BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Sphere 4
Applied Assay ID Biosample Replicate Assay
DCD000851AA DCD012298BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000687SQ DCD000875TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 03/12/2013
DCD000351DT: FASTQ
DCD001795DT: LOG GRCz10/danRer10
DCD001796DT: TSV GRCz10/danRer10
DCD001797DT: BEDGRAPH GRCz10/danRer10
DCD001799DT: BEDGRAPH GRCz10/danRer10
DCD001800DT: BEDGRAPH GRCz10/danRer10
DCD001801DT: BEDGRAPH GRCz10/danRer10
DCD001802DT: BEDGRAPH GRCz10/danRer10
DCD001803DT: PDF GRCz10/danRer10
DCD001804DT: LOG GRCz10/danRer10
DCD001805DT: LOG GRCz10/danRer10
DCD001806DT: PDF GRCz10/danRer10
DCD001823DT: BAM GRCz10/danRer10
DCD008664DT: BIGWIG GRCz10/danRer10
DCD008667DT: BIGWIG GRCz10/danRer10
DCD014417DT: LOG GRCz11/danRer11
DCD014418DT: TSV GRCz11/danRer11
DCD014422DT: TSV GRCz11/danRer11
DCD014423DT: BEDGRAPH GRCz11/danRer11
DCD014424DT: BEDGRAPH GRCz11/danRer11
DCD014425DT: BAM GRCz11/danRer11
DCD014426DT: BEDGRAPH GRCz11/danRer11
DCD014427DT: BEDGRAPH GRCz11/danRer11
DCD014428DT: LOG GRCz11/danRer11
DCD014429DT: PDF GRCz11/danRer11
DCD014430DT: BIGWIG GRCz11/danRer11
DCD014431DT: BIGWIG GRCz11/danRer11
DCD014432DT: LOG GRCz11/danRer11
DCD014433DT: PDF GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000688SQ DCD000875TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/20/2013
DCD000352DT: FASTQ
DCD001975DT: LOG GRCz10/danRer10
DCD001976DT: TSV GRCz10/danRer10
DCD001978DT: BEDGRAPH GRCz10/danRer10
DCD001979DT: BEDGRAPH GRCz10/danRer10
DCD001980DT: BEDGRAPH GRCz10/danRer10
DCD001981DT: BEDGRAPH GRCz10/danRer10
DCD001982DT: BEDGRAPH GRCz10/danRer10
DCD001983DT: PDF GRCz10/danRer10
DCD001984DT: LOG GRCz10/danRer10
DCD001985DT: PDF GRCz10/danRer10
DCD001986DT: LOG GRCz10/danRer10
DCD001991DT: BAM GRCz10/danRer10
DCD008656DT: BIGWIG GRCz10/danRer10
DCD008657DT: BIGWIG GRCz10/danRer10
DCD014434DT: LOG GRCz11/danRer11
DCD014435DT: TSV GRCz11/danRer11
DCD014436DT: TSV GRCz11/danRer11
DCD014437DT: BAM GRCz11/danRer11
DCD014438DT: BIGWIG GRCz11/danRer11
DCD014439DT: BEDGRAPH GRCz11/danRer11
DCD014440DT: BEDGRAPH GRCz11/danRer11
DCD014441DT: BEDGRAPH GRCz11/danRer11
DCD014442DT: BEDGRAPH GRCz11/danRer11
DCD014443DT: BIGWIG GRCz11/danRer11
DCD014444DT: LOG GRCz11/danRer11
DCD014445DT: LOG GRCz11/danRer11
DCD014446DT: PDF GRCz11/danRer11
DCD014447DT: PDF GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006208BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Sphere 4
Applied Assay ID Biosample Replicate Assay
DCD000857AA DCD012304BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000670SQ DCD000881TR Giraldez Lab, Yale Illumina HiSeq 2000 reverse 11/27/2012
DCD000366DT: FASTQ
DCD003105DT: LOG GRCz10/danRer10
DCD003106DT: TSV GRCz10/danRer10
DCD003107DT: BEDGRAPH GRCz10/danRer10
DCD003108DT: BEDGRAPH GRCz10/danRer10
DCD003109DT: BEDGRAPH GRCz10/danRer10
DCD003110DT: BEDGRAPH GRCz10/danRer10
DCD003111DT: PDF GRCz10/danRer10
DCD003112DT: BEDGRAPH GRCz10/danRer10
DCD003113DT: LOG GRCz10/danRer10
DCD003114DT: PDF GRCz10/danRer10
DCD003115DT: LOG GRCz10/danRer10
DCD003121DT: BAM GRCz10/danRer10
DCD008631DT: BIGWIG GRCz10/danRer10
DCD008633DT: BIGWIG GRCz10/danRer10
DCD014349DT: LOG GRCz11/danRer11
DCD014350DT: TSV GRCz11/danRer11
DCD014351DT: TSV GRCz11/danRer11
DCD014352DT: BEDGRAPH GRCz11/danRer11
DCD014353DT: BAM GRCz11/danRer11
DCD014355DT: BEDGRAPH GRCz11/danRer11
DCD014356DT: BIGWIG GRCz11/danRer11
DCD014357DT: BIGWIG GRCz11/danRer11
DCD014358DT: BEDGRAPH GRCz11/danRer11
DCD014359DT: BEDGRAPH GRCz11/danRer11
DCD014360DT: LOG GRCz11/danRer11
DCD014362DT: LOG GRCz11/danRer11
DCD014363DT: PDF GRCz11/danRer11
DCD014364DT: PDF GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006209BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU 64-cell 2
Applied Assay ID Biosample Replicate Assay
DCD000858AA DCD012305BR Ribo-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000701SQ DCD000882TR Giraldez Lab, Yale Illumina HiSeq 2500 forward 03/25/2013
DCD000476DT: FASTQ
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006210BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU 64-cell 2
Applied Assay ID Biosample Replicate Assay
DCD000859AA DCD012306BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000802SQ DCD000883TR Giraldez Lab, Yale Illumina HiSeq 2000 reverse 04/23/2013
DCD000364DT: FASTQ
DCD004197DT: LOG GRCz10/danRer10
DCD004198DT: TSV GRCz10/danRer10
DCD004199DT: BEDGRAPH GRCz10/danRer10
DCD004200DT: BEDGRAPH GRCz10/danRer10
DCD004201DT: BEDGRAPH GRCz10/danRer10
DCD004203DT: PDF GRCz10/danRer10
DCD004204DT: BEDGRAPH GRCz10/danRer10
DCD004205DT: LOG GRCz10/danRer10
DCD004206DT: BEDGRAPH GRCz10/danRer10
DCD004207DT: PDF GRCz10/danRer10
DCD004208DT: LOG GRCz10/danRer10
DCD004210DT: BAM GRCz10/danRer10
DCD008540DT: BIGWIG GRCz10/danRer10
DCD008541DT: BIGWIG GRCz10/danRer10
DCD013323DT: LOG GRCz11/danRer11
DCD013324DT: TSV GRCz11/danRer11
DCD013325DT: TSV GRCz11/danRer11
DCD013326DT: BEDGRAPH GRCz11/danRer11
DCD013327DT: BEDGRAPH GRCz11/danRer11
DCD013328DT: BAM GRCz11/danRer11
DCD013329DT: PDF GRCz11/danRer11
DCD013330DT: BIGWIG GRCz11/danRer11
DCD013331DT: BIGWIG GRCz11/danRer11
DCD013332DT: BEDGRAPH GRCz11/danRer11
DCD013333DT: BEDGRAPH GRCz11/danRer11
DCD013334DT: LOG GRCz11/danRer11
DCD013335DT: LOG GRCz11/danRer11
DCD013337DT: PDF GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000803SQ DCD000883TR Giraldez Lab, Yale Illumina HiSeq 2000 reverse 11/27/2012
DCD000365DT: FASTQ
DCD003320DT: LOG GRCz10/danRer10
DCD003321DT: TSV GRCz10/danRer10
DCD003322DT: BEDGRAPH GRCz10/danRer10
DCD003324DT: BEDGRAPH GRCz10/danRer10
DCD003326DT: BEDGRAPH GRCz10/danRer10
DCD003327DT: BEDGRAPH GRCz10/danRer10
DCD003328DT: BEDGRAPH GRCz10/danRer10
DCD003329DT: PDF GRCz10/danRer10
DCD003330DT: LOG GRCz10/danRer10
DCD003331DT: LOG GRCz10/danRer10
DCD003332DT: PDF GRCz10/danRer10
DCD003342DT: BAM GRCz10/danRer10
DCD008628DT: BIGWIG GRCz10/danRer10
DCD008629DT: BIGWIG GRCz10/danRer10
DCD015064DT: LOG GRCz11/danRer11
DCD015065DT: TSV GRCz11/danRer11
DCD015066DT: BAM GRCz11/danRer11
DCD015067DT: TSV GRCz11/danRer11
DCD015068DT: BEDGRAPH GRCz11/danRer11
DCD015069DT: BEDGRAPH GRCz11/danRer11
DCD015070DT: BEDGRAPH GRCz11/danRer11
DCD015071DT: BEDGRAPH GRCz11/danRer11
DCD015072DT: PDF GRCz11/danRer11
DCD015073DT: BIGWIG GRCz11/danRer11
DCD015074DT: BIGWIG GRCz11/danRer11
DCD015075DT: LOG GRCz11/danRer11
DCD015076DT: PDF GRCz11/danRer11
DCD015077DT: LOG GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006212BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Sphere 4
Applied Assay ID Biosample Replicate Assay
DCD000861AA DCD012308BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000776SQ DCD000885TR Giraldez Lab, Yale Illumina HiSeq 2000 reverse 04/26/2013
DCD000469DT: FASTQ
DCD001807DT: LOG GRCz10/danRer10
DCD001809DT: TSV GRCz10/danRer10
DCD001810DT: BEDGRAPH GRCz10/danRer10
DCD001812DT: BEDGRAPH GRCz10/danRer10
DCD001813DT: BEDGRAPH GRCz10/danRer10
DCD001814DT: PDF GRCz10/danRer10
DCD001815DT: LOG GRCz10/danRer10
DCD001816DT: PDF GRCz10/danRer10
DCD001817DT: BEDGRAPH GRCz10/danRer10
DCD001818DT: LOG GRCz10/danRer10
DCD001820DT: BEDGRAPH GRCz10/danRer10
DCD001849DT: BAM GRCz10/danRer10
DCD008662DT: BIGWIG GRCz10/danRer10
DCD008663DT: BIGWIG GRCz10/danRer10
DCD014937DT: LOG GRCz11/danRer11
DCD014939DT: TSV GRCz11/danRer11
DCD014940DT: TSV GRCz11/danRer11
DCD014941DT: BEDGRAPH GRCz11/danRer11
DCD014942DT: BIGWIG GRCz11/danRer11
DCD014943DT: BEDGRAPH GRCz11/danRer11
DCD014944DT: BEDGRAPH GRCz11/danRer11
DCD014945DT: BEDGRAPH GRCz11/danRer11
DCD014946DT: BIGWIG GRCz11/danRer11
DCD014947DT: BAM GRCz11/danRer11
DCD014948DT: LOG GRCz11/danRer11
DCD014949DT: PDF GRCz11/danRer11
DCD014950DT: PDF GRCz11/danRer11
DCD014951DT: LOG GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006213BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Sphere 4
Applied Assay ID Biosample Replicate Assay
DCD000862AA DCD012309BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000715SQ DCD000886TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/27/2013
DCD000480DT: FASTQ
DCD003380DT: LOG GRCz10/danRer10
DCD003381DT: TSV GRCz10/danRer10
DCD003382DT: BEDGRAPH GRCz10/danRer10
DCD003383DT: BEDGRAPH GRCz10/danRer10
DCD003384DT: BAM GRCz10/danRer10
DCD003385DT: BEDGRAPH GRCz10/danRer10
DCD003386DT: BEDGRAPH GRCz10/danRer10
DCD003387DT: BEDGRAPH GRCz10/danRer10
DCD003388DT: PDF GRCz10/danRer10
DCD003389DT: LOG GRCz10/danRer10
DCD003390DT: PDF GRCz10/danRer10
DCD003392DT: LOG GRCz10/danRer10
DCD008620DT: BIGWIG GRCz10/danRer10
DCD008621DT: BIGWIG GRCz10/danRer10
DCD014574DT: BAM GRCz11/danRer11
DCD014575DT: LOG GRCz11/danRer11
DCD014576DT: TSV GRCz11/danRer11
DCD014577DT: TSV GRCz11/danRer11
DCD014578DT: BEDGRAPH GRCz11/danRer11
DCD014579DT: BEDGRAPH GRCz11/danRer11
DCD014580DT: BEDGRAPH GRCz11/danRer11
DCD014581DT: PDF GRCz11/danRer11
DCD014582DT: LOG GRCz11/danRer11
DCD014583DT: BIGWIG GRCz11/danRer11
DCD014584DT: BIGWIG GRCz11/danRer11
DCD014585DT: BEDGRAPH GRCz11/danRer11
DCD014586DT: PDF GRCz11/danRer11
DCD014588DT: LOG GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000716SQ DCD000886TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 03/12/2013
DCD000479DT: FASTQ
DCD002035DT: LOG GRCz10/danRer10
DCD002036DT: TSV GRCz10/danRer10
DCD002037DT: BEDGRAPH GRCz10/danRer10
DCD002039DT: BEDGRAPH GRCz10/danRer10
DCD002040DT: BEDGRAPH GRCz10/danRer10
DCD002041DT: BEDGRAPH GRCz10/danRer10
DCD002042DT: PDF GRCz10/danRer10
DCD002043DT: LOG GRCz10/danRer10
DCD002044DT: BEDGRAPH GRCz10/danRer10
DCD002045DT: PDF GRCz10/danRer10
DCD002046DT: LOG GRCz10/danRer10
DCD002052DT: BAM GRCz10/danRer10
DCD008646DT: BIGWIG GRCz10/danRer10
DCD008647DT: BIGWIG GRCz10/danRer10
DCD014587DT: LOG GRCz11/danRer11
DCD014589DT: TSV GRCz11/danRer11
DCD014590DT: TSV GRCz11/danRer11
DCD014591DT: BEDGRAPH GRCz11/danRer11
DCD014592DT: BIGWIG GRCz11/danRer11
DCD014593DT: BEDGRAPH GRCz11/danRer11
DCD014594DT: BEDGRAPH GRCz11/danRer11
DCD014595DT: BEDGRAPH GRCz11/danRer11
DCD014596DT: BAM GRCz11/danRer11
DCD014597DT: PDF GRCz11/danRer11
DCD014598DT: BIGWIG GRCz11/danRer11
DCD014599DT: LOG GRCz11/danRer11
DCD014600DT: LOG GRCz11/danRer11
DCD014601DT: PDF GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000718SQ DCD000886TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/27/2013
DCD000481DT: FASTQ
DCD003236DT: LOG GRCz10/danRer10
DCD003238DT: TSV GRCz10/danRer10
DCD003239DT: BEDGRAPH GRCz10/danRer10
DCD003241DT: BEDGRAPH GRCz10/danRer10
DCD003242DT: BEDGRAPH GRCz10/danRer10
DCD003243DT: PDF GRCz10/danRer10
DCD003244DT: BEDGRAPH GRCz10/danRer10
DCD003245DT: LOG GRCz10/danRer10
DCD003246DT: PDF GRCz10/danRer10
DCD003247DT: BEDGRAPH GRCz10/danRer10
DCD003248DT: LOG GRCz10/danRer10
DCD003252DT: BAM GRCz10/danRer10
DCD008634DT: BIGWIG GRCz10/danRer10
DCD008638DT: BIGWIG GRCz10/danRer10
DCD014602DT: LOG GRCz11/danRer11
DCD014603DT: TSV GRCz11/danRer11
DCD014604DT: TSV GRCz11/danRer11
DCD014605DT: BEDGRAPH GRCz11/danRer11
DCD014606DT: BEDGRAPH GRCz11/danRer11
DCD014607DT: BAM GRCz11/danRer11
DCD014608DT: BEDGRAPH GRCz11/danRer11
DCD014609DT: BEDGRAPH GRCz11/danRer11
DCD014610DT: PDF GRCz11/danRer11
DCD014611DT: BIGWIG GRCz11/danRer11
DCD014612DT: BIGWIG GRCz11/danRer11
DCD014613DT: LOG GRCz11/danRer11
DCD014614DT: LOG GRCz11/danRer11
DCD014615DT: PDF GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006217BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU 75%-epiboly 8
Applied Assay ID Biosample Replicate Assay
DCD000866AA DCD012313BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000799SQ DCD000890TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 04/26/2013
DCD000472DT: FASTQ
DCD003200DT: LOG GRCz10/danRer10
DCD003201DT: TSV GRCz10/danRer10
DCD003202DT: BEDGRAPH GRCz10/danRer10
DCD003204DT: BEDGRAPH GRCz10/danRer10
DCD003205DT: BEDGRAPH GRCz10/danRer10
DCD003206DT: BEDGRAPH GRCz10/danRer10
DCD003207DT: PDF GRCz10/danRer10
DCD003208DT: BEDGRAPH GRCz10/danRer10
DCD003209DT: LOG GRCz10/danRer10
DCD003210DT: PDF GRCz10/danRer10
DCD003211DT: LOG GRCz10/danRer10
DCD003215DT: BAM GRCz10/danRer10
DCD008600DT: BIGWIG GRCz10/danRer10
DCD008601DT: BIGWIG GRCz10/danRer10
DCD015036DT: BAM GRCz11/danRer11
DCD015037DT: LOG GRCz11/danRer11
DCD015038DT: TSV GRCz11/danRer11
DCD015039DT: TSV GRCz11/danRer11
DCD015040DT: BEDGRAPH GRCz11/danRer11
DCD015041DT: BEDGRAPH GRCz11/danRer11
DCD015042DT: BEDGRAPH GRCz11/danRer11
DCD015043DT: BIGWIG GRCz11/danRer11
DCD015044DT: BIGWIG GRCz11/danRer11
DCD015045DT: BEDGRAPH GRCz11/danRer11
DCD015046DT: LOG GRCz11/danRer11
DCD015047DT: PDF GRCz11/danRer11
DCD015048DT: PDF GRCz11/danRer11
DCD015050DT: LOG GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006219BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Shield 6
Applied Assay ID Biosample Replicate Assay
DCD000868AA DCD012315BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000804SQ DCD000892TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 04/26/2013
DCD000473DT: FASTQ
DCD003212DT: LOG GRCz10/danRer10
DCD003213DT: TSV GRCz10/danRer10
DCD003214DT: BEDGRAPH GRCz10/danRer10
DCD003216DT: BEDGRAPH GRCz10/danRer10
DCD003217DT: BEDGRAPH GRCz10/danRer10
DCD003218DT: BEDGRAPH GRCz10/danRer10
DCD003219DT: PDF GRCz10/danRer10
DCD003220DT: LOG GRCz10/danRer10
DCD003221DT: PDF GRCz10/danRer10
DCD003222DT: BEDGRAPH GRCz10/danRer10
DCD003223DT: LOG GRCz10/danRer10
DCD003227DT: BAM GRCz10/danRer10
DCD008590DT: BIGWIG GRCz10/danRer10
DCD008591DT: BIGWIG GRCz10/danRer10
DCD015078DT: LOG GRCz11/danRer11
DCD015079DT: TSV GRCz11/danRer11
DCD015080DT: BAM GRCz11/danRer11
DCD015081DT: TSV GRCz11/danRer11
DCD015082DT: BEDGRAPH GRCz11/danRer11
DCD015083DT: BEDGRAPH GRCz11/danRer11
DCD015084DT: BEDGRAPH GRCz11/danRer11
DCD015085DT: BEDGRAPH GRCz11/danRer11
DCD015086DT: PDF GRCz11/danRer11
DCD015087DT: BIGWIG GRCz11/danRer11
DCD015088DT: BIGWIG GRCz11/danRer11
DCD015089DT: LOG GRCz11/danRer11
DCD015090DT: LOG GRCz11/danRer11
DCD015091DT: PDF GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006224BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Shield 6
Applied Assay ID Biosample Replicate Assay
DCD000873AA DCD012320BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000742SQ DCD000897TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 04/26/2013
DCD000471DT: FASTQ
DCD003452DT: LOG GRCz10/danRer10
DCD003454DT: TSV GRCz10/danRer10
DCD003455DT: BEDGRAPH GRCz10/danRer10
DCD003456DT: BEDGRAPH GRCz10/danRer10
DCD003457DT: BEDGRAPH GRCz10/danRer10
DCD003458DT: BEDGRAPH GRCz10/danRer10
DCD003459DT: PDF GRCz10/danRer10
DCD003460DT: BEDGRAPH GRCz10/danRer10
DCD003461DT: LOG GRCz10/danRer10
DCD003462DT: PDF GRCz10/danRer10
DCD003463DT: LOG GRCz10/danRer10
DCD003468DT: BAM GRCz10/danRer10
DCD008576DT: BIGWIG GRCz10/danRer10
DCD008577DT: BIGWIG GRCz10/danRer10
DCD014769DT: LOG GRCz11/danRer11
DCD014770DT: TSV GRCz11/danRer11
DCD014771DT: TSV GRCz11/danRer11
DCD014772DT: BEDGRAPH GRCz11/danRer11
DCD014774DT: BAM GRCz11/danRer11
DCD014775DT: BEDGRAPH GRCz11/danRer11
DCD014776DT: BIGWIG GRCz11/danRer11
DCD014777DT: BEDGRAPH GRCz11/danRer11
DCD014778DT: BEDGRAPH GRCz11/danRer11
DCD014779DT: BIGWIG GRCz11/danRer11
DCD014780DT: PDF GRCz11/danRer11
DCD014781DT: LOG GRCz11/danRer11
DCD014782DT: PDF GRCz11/danRer11
DCD014783DT: LOG GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006225BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU 75%-epiboly 8
Applied Assay ID Biosample Replicate Assay
DCD000874AA DCD012321BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000703SQ DCD000898TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 04/26/2013
DCD000470DT: FASTQ
DCD003428DT: LOG GRCz10/danRer10
DCD003429DT: TSV GRCz10/danRer10
DCD003431DT: BEDGRAPH GRCz10/danRer10
DCD003432DT: BEDGRAPH GRCz10/danRer10
DCD003433DT: BEDGRAPH GRCz10/danRer10
DCD003434DT: BEDGRAPH GRCz10/danRer10
DCD003435DT: PDF GRCz10/danRer10
DCD003436DT: BEDGRAPH GRCz10/danRer10
DCD003437DT: LOG GRCz10/danRer10
DCD003438DT: PDF GRCz10/danRer10
DCD003440DT: LOG GRCz10/danRer10
DCD003446DT: BAM GRCz10/danRer10
DCD008586DT: BIGWIG GRCz10/danRer10
DCD008587DT: BIGWIG GRCz10/danRer10
DCD014530DT: LOG GRCz11/danRer11
DCD014533DT: TSV GRCz11/danRer11
DCD014534DT: TSV GRCz11/danRer11
DCD014535DT: BEDGRAPH GRCz11/danRer11
DCD014536DT: BEDGRAPH GRCz11/danRer11
DCD014537DT: BEDGRAPH GRCz11/danRer11
DCD014538DT: BEDGRAPH GRCz11/danRer11
DCD014539DT: BIGWIG GRCz11/danRer11
DCD014540DT: BAM GRCz11/danRer11
DCD014541DT: LOG GRCz11/danRer11
DCD014542DT: LOG GRCz11/danRer11
DCD014543DT: PDF GRCz11/danRer11
DCD014544DT: PDF GRCz11/danRer11
DCD014545DT: BIGWIG GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006226BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Sphere 4
Applied Assay ID Biosample Replicate Assay
DCD000875AA DCD012322BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000671SQ DCD000899TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/27/2013
DCD000491DT: FASTQ
DCD003152DT: LOG GRCz10/danRer10
DCD003153DT: TSV GRCz10/danRer10
DCD003154DT: BEDGRAPH GRCz10/danRer10
DCD003155DT: BEDGRAPH GRCz10/danRer10
DCD003156DT: BEDGRAPH GRCz10/danRer10
DCD003157DT: BEDGRAPH GRCz10/danRer10
DCD003158DT: BEDGRAPH GRCz10/danRer10
DCD003160DT: PDF GRCz10/danRer10
DCD003161DT: PDF GRCz10/danRer10
DCD003162DT: LOG GRCz10/danRer10
DCD003163DT: LOG GRCz10/danRer10
DCD003166DT: BAM GRCz10/danRer10
DCD008623DT: BIGWIG GRCz10/danRer10
DCD008625DT: BIGWIG GRCz10/danRer10
DCD014361DT: LOG GRCz11/danRer11
DCD014365DT: BAM GRCz11/danRer11
DCD014366DT: TSV GRCz11/danRer11
DCD014367DT: TSV GRCz11/danRer11
DCD014368DT: BEDGRAPH GRCz11/danRer11
DCD014369DT: BEDGRAPH GRCz11/danRer11
DCD014370DT: BEDGRAPH GRCz11/danRer11
DCD014371DT: BEDGRAPH GRCz11/danRer11
DCD014372DT: LOG GRCz11/danRer11
DCD014373DT: PDF GRCz11/danRer11
DCD014374DT: PDF GRCz11/danRer11
DCD014375DT: BIGWIG GRCz11/danRer11
DCD014376DT: BIGWIG GRCz11/danRer11
DCD014377DT: LOG GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000672SQ DCD000899TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/27/2013
DCD000490DT: FASTQ
DCD003536DT: LOG GRCz10/danRer10
DCD003537DT: TSV GRCz10/danRer10
DCD003539DT: BEDGRAPH GRCz10/danRer10
DCD003541DT: BEDGRAPH GRCz10/danRer10
DCD003542DT: BEDGRAPH GRCz10/danRer10
DCD003543DT: BEDGRAPH GRCz10/danRer10
DCD003544DT: PDF GRCz10/danRer10
DCD003545DT: BEDGRAPH GRCz10/danRer10
DCD003546DT: LOG GRCz10/danRer10
DCD003547DT: PDF GRCz10/danRer10
DCD003548DT: LOG GRCz10/danRer10
DCD003552DT: BAM GRCz10/danRer10
DCD008618DT: BIGWIG GRCz10/danRer10
DCD008619DT: BIGWIG GRCz10/danRer10
DCD014378DT: LOG GRCz11/danRer11
DCD014379DT: TSV GRCz11/danRer11
DCD014380DT: TSV GRCz11/danRer11
DCD014381DT: BEDGRAPH GRCz11/danRer11
DCD014382DT: BEDGRAPH GRCz11/danRer11
DCD014383DT: BAM GRCz11/danRer11
DCD014384DT: LOG GRCz11/danRer11
DCD014385DT: PDF GRCz11/danRer11
DCD014386DT: BIGWIG GRCz11/danRer11
DCD014387DT: BIGWIG GRCz11/danRer11
DCD014388DT: BEDGRAPH GRCz11/danRer11
DCD014389DT: BEDGRAPH GRCz11/danRer11
DCD014391DT: LOG GRCz11/danRer11
DCD014392DT: PDF GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000673SQ DCD000899TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/20/2013
DCD000492DT: FASTQ
DCD003524DT: LOG GRCz10/danRer10
DCD003526DT: BEDGRAPH GRCz10/danRer10
DCD003527DT: TSV GRCz10/danRer10
DCD003528DT: BEDGRAPH GRCz10/danRer10
DCD003529DT: BEDGRAPH GRCz10/danRer10
DCD003530DT: BEDGRAPH GRCz10/danRer10
DCD003531DT: BEDGRAPH GRCz10/danRer10
DCD003532DT: PDF GRCz10/danRer10
DCD003533DT: LOG GRCz10/danRer10
DCD003534DT: PDF GRCz10/danRer10
DCD003535DT: LOG GRCz10/danRer10
DCD003538DT: BAM GRCz10/danRer10
DCD008616DT: BIGWIG GRCz10/danRer10
DCD008617DT: BIGWIG GRCz10/danRer10
DCD014390DT: LOG GRCz11/danRer11
DCD014393DT: TSV GRCz11/danRer11
DCD014394DT: TSV GRCz11/danRer11
DCD014395DT: BAM GRCz11/danRer11
DCD014396DT: BIGWIG GRCz11/danRer11
DCD014397DT: BIGWIG GRCz11/danRer11
DCD014398DT: BEDGRAPH GRCz11/danRer11
DCD014399DT: BEDGRAPH GRCz11/danRer11
DCD014400DT: BEDGRAPH GRCz11/danRer11
DCD014401DT: BEDGRAPH GRCz11/danRer11
DCD014402DT: LOG GRCz11/danRer11
DCD014404DT: LOG GRCz11/danRer11
DCD014405DT: PDF GRCz11/danRer11
DCD014406DT: PDF GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006227BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Sphere 4
Applied Assay ID Biosample Replicate Assay
DCD000876AA DCD012323BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000739SQ DCD000900TR Giraldez Lab, Yale Illumina HiSeq 2000 reverse 04/26/2013
DCD000468DT: FASTQ
DCD001831DT: LOG GRCz10/danRer10
DCD001832DT: TSV GRCz10/danRer10
DCD001833DT: BEDGRAPH GRCz10/danRer10
DCD001836DT: BEDGRAPH GRCz10/danRer10
DCD001837DT: BEDGRAPH GRCz10/danRer10
DCD001838DT: BEDGRAPH GRCz10/danRer10
DCD001839DT: PDF GRCz10/danRer10
DCD001840DT: LOG GRCz10/danRer10
DCD001841DT: PDF GRCz10/danRer10
DCD001842DT: LOG GRCz10/danRer10
DCD001846DT: BEDGRAPH GRCz10/danRer10
DCD001871DT: BAM GRCz10/danRer10
DCD008608DT: BIGWIG GRCz10/danRer10
DCD008609DT: BIGWIG GRCz10/danRer10
DCD014741DT: LOG GRCz11/danRer11
DCD014742DT: TSV GRCz11/danRer11
DCD014744DT: TSV GRCz11/danRer11
DCD014745DT: BEDGRAPH GRCz11/danRer11
DCD014746DT: BEDGRAPH GRCz11/danRer11
DCD014747DT: PDF GRCz11/danRer11
DCD014748DT: BIGWIG GRCz11/danRer11
DCD014749DT: BIGWIG GRCz11/danRer11
DCD014750DT: BEDGRAPH GRCz11/danRer11
DCD014751DT: BEDGRAPH GRCz11/danRer11
DCD014752DT: LOG GRCz11/danRer11
DCD014753DT: LOG GRCz11/danRer11
DCD014754DT: PDF GRCz11/danRer11
DCD014758DT: BAM GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006230BS DCD000141SR whole organism Giraldez Lab, Yale AB/TU Shield 6
Applied Assay ID Biosample Replicate Assay
DCD000879AA DCD012326BR RNA-seq_Giraldez_Lab_0001AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Strand Sequencing Date
DCD000736SQ DCD000903TR Giraldez Lab, Yale Illumina HiSeq 2500 reverse 02/20/2013
DCD000358DT: FASTQ
DCD003632DT: LOG GRCz10/danRer10
DCD003633DT: TSV GRCz10/danRer10
DCD003634DT: BEDGRAPH GRCz10/danRer10
DCD003636DT: BEDGRAPH GRCz10/danRer10
DCD003637DT: BEDGRAPH GRCz10/danRer10
DCD003638DT: BEDGRAPH GRCz10/danRer10