Series Summary for DCD000324SR

Baseline expression from transcriptional profiling of zebrafish developmental stages

Survey

10.7554/eLife.30860

PRJEB12982

Establish baseline expression transcriptional signatures for zebrafish developmental stages. Total RNA was extracted from single wild type zebrafish embryos at a series of different developmental stages. RNA from 12 embryos was pooled to generate a replicate.The RNA was DNase treated. Stranded RNAseq libraries were constructed using the Illumina TruSeq Stranded RNA protocol with oligo dT pulldown.This data is part of a pre-publication release.

True

mickael.dong

May 2, 2017, 7:18 a.m.

Oct. 21, 2018, 6:40 p.m.

Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006872BS DCD000324SR whole organism Busch-Nentwich Lab, Wellcome Trust Sanger Institute HLF 75%-epiboly 8
Applied Assay ID Biosample Replicate Assay
DCD001818AA DCD013304BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002220SQ DCD002166TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004649DT: FASTQ
DCD005720DT: LOG GRCz10/danRer10
DCD005721DT: TSV GRCz10/danRer10
DCD005722DT: BEDGRAPH GRCz10/danRer10
DCD005724DT: BEDGRAPH GRCz10/danRer10
DCD005725DT: BEDGRAPH GRCz10/danRer10
DCD005726DT: BEDGRAPH GRCz10/danRer10
DCD005727DT: PDF GRCz10/danRer10
DCD005728DT: BEDGRAPH GRCz10/danRer10
DCD005729DT: LOG GRCz10/danRer10
DCD005730DT: PDF GRCz10/danRer10
DCD005731DT: LOG GRCz10/danRer10
DCD005744DT: BAM GRCz10/danRer10
DCD008304DT: BIGWIG GRCz10/danRer10
DCD008307DT: BIGWIG GRCz10/danRer10
DCD012354DT: LOG GRCz11/danRer11
DCD012355DT: TSV GRCz11/danRer11
DCD012356DT: TSV GRCz11/danRer11
DCD012357DT: BEDGRAPH GRCz11/danRer11
DCD012358DT: BAM GRCz11/danRer11
DCD012359DT: BIGWIG GRCz11/danRer11
DCD012360DT: BIGWIG GRCz11/danRer11
DCD012361DT: BEDGRAPH GRCz11/danRer11
DCD012362DT: BEDGRAPH GRCz11/danRer11
DCD012363DT: BEDGRAPH GRCz11/danRer11
DCD012364DT: PDF GRCz11/danRer11
DCD012366DT: LOG GRCz11/danRer11
DCD012367DT: LOG GRCz11/danRer11
DCD012368DT: PDF GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001867AA DCD013305BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002204SQ DCD002225TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004648DT: FASTQ
DCD005757DT: LOG GRCz10/danRer10
DCD005758DT: BEDGRAPH GRCz10/danRer10
DCD005759DT: TSV GRCz10/danRer10
DCD005760DT: BEDGRAPH GRCz10/danRer10
DCD005761DT: BEDGRAPH GRCz10/danRer10
DCD005762DT: PDF GRCz10/danRer10
DCD005763DT: BEDGRAPH GRCz10/danRer10
DCD005764DT: BEDGRAPH GRCz10/danRer10
DCD005765DT: LOG GRCz10/danRer10
DCD005766DT: PDF GRCz10/danRer10
DCD005767DT: LOG GRCz10/danRer10
DCD005795DT: BAM GRCz10/danRer10
DCD008341DT: BIGWIG GRCz10/danRer10
DCD008343DT: BIGWIG GRCz10/danRer10
DCD012126DT: LOG GRCz11/danRer11
DCD012131DT: BAM GRCz11/danRer11
DCD012132DT: TSV GRCz11/danRer11
DCD012133DT: TSV GRCz11/danRer11
DCD012134DT: BEDGRAPH GRCz11/danRer11
DCD012135DT: BEDGRAPH GRCz11/danRer11
DCD012136DT: BEDGRAPH GRCz11/danRer11
DCD012137DT: BEDGRAPH GRCz11/danRer11
DCD012138DT: LOG GRCz11/danRer11
DCD012139DT: PDF GRCz11/danRer11
DCD012140DT: PDF GRCz11/danRer11
DCD012141DT: BIGWIG GRCz11/danRer11
DCD012142DT: BIGWIG GRCz11/danRer11
DCD012143DT: LOG GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001811AA DCD013306BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002172SQ DCD002159TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004652DT: FASTQ
DCD005839DT: LOG GRCz10/danRer10
DCD005840DT: TSV GRCz10/danRer10
DCD005843DT: BEDGRAPH GRCz10/danRer10
DCD005845DT: BEDGRAPH GRCz10/danRer10
DCD005846DT: BEDGRAPH GRCz10/danRer10
DCD005847DT: BEDGRAPH GRCz10/danRer10
DCD005848DT: BEDGRAPH GRCz10/danRer10
DCD005849DT: PDF GRCz10/danRer10
DCD005850DT: LOG GRCz10/danRer10
DCD005851DT: PDF GRCz10/danRer10
DCD005852DT: LOG GRCz10/danRer10
DCD005868DT: BAM GRCz10/danRer10
DCD008329DT: BIGWIG GRCz10/danRer10
DCD008331DT: BIGWIG GRCz10/danRer10
DCD011682DT: LOG GRCz11/danRer11
DCD011683DT: BAM GRCz11/danRer11
DCD011684DT: TSV GRCz11/danRer11
DCD011685DT: TSV GRCz11/danRer11
DCD011686DT: BEDGRAPH GRCz11/danRer11
DCD011687DT: BEDGRAPH GRCz11/danRer11
DCD011688DT: BEDGRAPH GRCz11/danRer11
DCD011689DT: BEDGRAPH GRCz11/danRer11
DCD011690DT: BIGWIG GRCz11/danRer11
DCD011691DT: BIGWIG GRCz11/danRer11
DCD011692DT: LOG GRCz11/danRer11
DCD011693DT: PDF GRCz11/danRer11
DCD011694DT: PDF GRCz11/danRer11
DCD011695DT: LOG GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001812AA DCD013307BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002207SQ DCD002180TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004651DT: FASTQ
DCD005408DT: LOG GRCz10/danRer10
DCD005410DT: BEDGRAPH GRCz10/danRer10
DCD005411DT: TSV GRCz10/danRer10
DCD005412DT: BEDGRAPH GRCz10/danRer10
DCD005413DT: BEDGRAPH GRCz10/danRer10
DCD005414DT: BEDGRAPH GRCz10/danRer10
DCD005415DT: BEDGRAPH GRCz10/danRer10
DCD005416DT: PDF GRCz10/danRer10
DCD005417DT: LOG GRCz10/danRer10
DCD005418DT: PDF GRCz10/danRer10
DCD005419DT: LOG GRCz10/danRer10
DCD005433DT: BAM GRCz10/danRer10
DCD008394DT: BIGWIG GRCz10/danRer10
DCD008395DT: BIGWIG GRCz10/danRer10
DCD012172DT: BAM GRCz11/danRer11
DCD012173DT: LOG GRCz11/danRer11
DCD012174DT: TSV GRCz11/danRer11
DCD012175DT: TSV GRCz11/danRer11
DCD012176DT: BEDGRAPH GRCz11/danRer11
DCD012177DT: BEDGRAPH GRCz11/danRer11
DCD012178DT: BEDGRAPH GRCz11/danRer11
DCD012179DT: BEDGRAPH GRCz11/danRer11
DCD012180DT: LOG GRCz11/danRer11
DCD012181DT: PDF GRCz11/danRer11
DCD012182DT: BIGWIG GRCz11/danRer11
DCD012183DT: BIGWIG GRCz11/danRer11
DCD012184DT: PDF GRCz11/danRer11
DCD012185DT: LOG GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001817AA DCD013308BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002188SQ DCD002200TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004650DT: FASTQ
DCD005072DT: LOG GRCz10/danRer10
DCD005073DT: BEDGRAPH GRCz10/danRer10
DCD005074DT: TSV GRCz10/danRer10
DCD005076DT: BEDGRAPH GRCz10/danRer10
DCD005077DT: BEDGRAPH GRCz10/danRer10
DCD005078DT: PDF GRCz10/danRer10
DCD005079DT: BEDGRAPH GRCz10/danRer10
DCD005080DT: LOG GRCz10/danRer10
DCD005081DT: BEDGRAPH GRCz10/danRer10
DCD005082DT: LOG GRCz10/danRer10
DCD005083DT: PDF GRCz10/danRer10
DCD005095DT: BAM GRCz10/danRer10
DCD008454DT: BIGWIG GRCz10/danRer10
DCD008456DT: BIGWIG GRCz10/danRer10
DCD011906DT: LOG GRCz11/danRer11
DCD011907DT: TSV GRCz11/danRer11
DCD011908DT: TSV GRCz11/danRer11
DCD011909DT: BAM GRCz11/danRer11
DCD011910DT: BEDGRAPH GRCz11/danRer11
DCD011911DT: BEDGRAPH GRCz11/danRer11
DCD011912DT: BIGWIG GRCz11/danRer11
DCD011913DT: BEDGRAPH GRCz11/danRer11
DCD011914DT: BEDGRAPH GRCz11/danRer11
DCD011915DT: PDF GRCz11/danRer11
DCD011916DT: BIGWIG GRCz11/danRer11
DCD011917DT: LOG GRCz11/danRer11
DCD011918DT: LOG GRCz11/danRer11
DCD011920DT: PDF GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006873BS DCD000324SR whole organism Busch-Nentwich Lab, Wellcome Trust Sanger Institute HLF 1-4 somites 10.33
Applied Assay ID Biosample Replicate Assay
DCD001870AA DCD013379BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002208SQ DCD002198TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004643DT: FASTQ
DCD005384DT: LOG GRCz10/danRer10
DCD005385DT: BEDGRAPH GRCz10/danRer10
DCD005386DT: TSV GRCz10/danRer10
DCD005388DT: BEDGRAPH GRCz10/danRer10
DCD005389DT: BEDGRAPH GRCz10/danRer10
DCD005391DT: BEDGRAPH GRCz10/danRer10
DCD005392DT: PDF GRCz10/danRer10
DCD005393DT: BEDGRAPH GRCz10/danRer10
DCD005394DT: LOG GRCz10/danRer10
DCD005395DT: LOG GRCz10/danRer10
DCD005396DT: PDF GRCz10/danRer10
DCD005409DT: BAM GRCz10/danRer10
DCD008387DT: BIGWIG GRCz10/danRer10
DCD008388DT: BIGWIG GRCz10/danRer10
DCD012186DT: LOG GRCz11/danRer11
DCD012187DT: TSV GRCz11/danRer11
DCD012188DT: TSV GRCz11/danRer11
DCD012189DT: BEDGRAPH GRCz11/danRer11
DCD012190DT: BAM GRCz11/danRer11
DCD012191DT: BEDGRAPH GRCz11/danRer11
DCD012192DT: BIGWIG GRCz11/danRer11
DCD012193DT: BIGWIG GRCz11/danRer11
DCD012194DT: BEDGRAPH GRCz11/danRer11
DCD012195DT: PDF GRCz11/danRer11
DCD012196DT: BEDGRAPH GRCz11/danRer11
DCD012197DT: LOG GRCz11/danRer11
DCD012199DT: LOG GRCz11/danRer11
DCD012200DT: PDF GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001871AA DCD013380BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002162SQ DCD002228TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004644DT: FASTQ
DCD005708DT: LOG GRCz10/danRer10
DCD005709DT: TSV GRCz10/danRer10
DCD005711DT: BEDGRAPH GRCz10/danRer10
DCD005712DT: BEDGRAPH GRCz10/danRer10
DCD005713DT: BEDGRAPH GRCz10/danRer10
DCD005714DT: BEDGRAPH GRCz10/danRer10
DCD005715DT: PDF GRCz10/danRer10
DCD005716DT: BEDGRAPH GRCz10/danRer10
DCD005717DT: LOG GRCz10/danRer10
DCD005718DT: PDF GRCz10/danRer10
DCD005719DT: LOG GRCz10/danRer10
DCD005735DT: BAM GRCz10/danRer10
DCD008346DT: BIGWIG GRCz10/danRer10
DCD008347DT: BIGWIG GRCz10/danRer10
DCD011542DT: LOG GRCz11/danRer11
DCD011543DT: TSV GRCz11/danRer11
DCD011544DT: TSV GRCz11/danRer11
DCD011545DT: BEDGRAPH GRCz11/danRer11
DCD011546DT: BEDGRAPH GRCz11/danRer11
DCD011547DT: BAM GRCz11/danRer11
DCD011548DT: BIGWIG GRCz11/danRer11
DCD011549DT: BEDGRAPH GRCz11/danRer11
DCD011550DT: PDF GRCz11/danRer11
DCD011551DT: BIGWIG GRCz11/danRer11
DCD011552DT: BEDGRAPH GRCz11/danRer11
DCD011553DT: LOG GRCz11/danRer11
DCD011554DT: LOG GRCz11/danRer11
DCD011556DT: PDF GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001866AA DCD013381BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002171SQ DCD002220TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004647DT: FASTQ
DCD005685DT: LOG GRCz10/danRer10
DCD005686DT: TSV GRCz10/danRer10
DCD005687DT: BEDGRAPH GRCz10/danRer10
DCD005688DT: BEDGRAPH GRCz10/danRer10
DCD005689DT: BEDGRAPH GRCz10/danRer10
DCD005690DT: BEDGRAPH GRCz10/danRer10
DCD005691DT: BEDGRAPH GRCz10/danRer10
DCD005692DT: LOG GRCz10/danRer10
DCD005693DT: PDF GRCz10/danRer10
DCD005694DT: PDF GRCz10/danRer10
DCD005695DT: LOG GRCz10/danRer10
DCD005710DT: BAM GRCz10/danRer10
DCD008348DT: BIGWIG GRCz10/danRer10
DCD008349DT: BIGWIG GRCz10/danRer10
DCD011668DT: LOG GRCz11/danRer11
DCD011669DT: TSV GRCz11/danRer11
DCD011670DT: TSV GRCz11/danRer11
DCD011671DT: BAM GRCz11/danRer11
DCD011672DT: BEDGRAPH GRCz11/danRer11
DCD011673DT: BEDGRAPH GRCz11/danRer11
DCD011674DT: BEDGRAPH GRCz11/danRer11
DCD011675DT: BEDGRAPH GRCz11/danRer11
DCD011676DT: BIGWIG GRCz11/danRer11
DCD011677DT: BIGWIG GRCz11/danRer11
DCD011678DT: LOG GRCz11/danRer11
DCD011679DT: PDF GRCz11/danRer11
DCD011680DT: LOG GRCz11/danRer11
DCD011681DT: PDF GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001868AA DCD013382BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002244SQ DCD002196TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004645DT: FASTQ
DCD005492DT: LOG GRCz10/danRer10
DCD005494DT: TSV GRCz10/danRer10
DCD005495DT: BEDGRAPH GRCz10/danRer10
DCD005496DT: BEDGRAPH GRCz10/danRer10
DCD005497DT: BEDGRAPH GRCz10/danRer10
DCD005498DT: BEDGRAPH GRCz10/danRer10
DCD005499DT: BEDGRAPH GRCz10/danRer10
DCD005500DT: PDF GRCz10/danRer10
DCD005501DT: LOG GRCz10/danRer10
DCD005503DT: PDF GRCz10/danRer10
DCD005504DT: LOG GRCz10/danRer10
DCD005516DT: BAM GRCz10/danRer10
DCD008386DT: BIGWIG GRCz10/danRer10
DCD008389DT: BIGWIG GRCz10/danRer10
DCD012690DT: LOG GRCz11/danRer11
DCD012691DT: BAM GRCz11/danRer11
DCD012692DT: TSV GRCz11/danRer11
DCD012693DT: TSV GRCz11/danRer11
DCD012694DT: BEDGRAPH GRCz11/danRer11
DCD012695DT: BEDGRAPH GRCz11/danRer11
DCD012696DT: BEDGRAPH GRCz11/danRer11
DCD012697DT: BEDGRAPH GRCz11/danRer11
DCD012698DT: BIGWIG GRCz11/danRer11
DCD012699DT: BIGWIG GRCz11/danRer11
DCD012700DT: LOG GRCz11/danRer11
DCD012701DT: PDF GRCz11/danRer11
DCD012702DT: PDF GRCz11/danRer11
DCD012703DT: LOG GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001869AA DCD013383BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002245SQ DCD002226TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004646DT: FASTQ
DCD005132DT: LOG GRCz10/danRer10
DCD005134DT: TSV GRCz10/danRer10
DCD005135DT: BEDGRAPH GRCz10/danRer10
DCD005136DT: BEDGRAPH GRCz10/danRer10
DCD005137DT: BEDGRAPH GRCz10/danRer10
DCD005138DT: BEDGRAPH GRCz10/danRer10
DCD005139DT: BEDGRAPH GRCz10/danRer10
DCD005140DT: PDF GRCz10/danRer10
DCD005141DT: LOG GRCz10/danRer10
DCD005142DT: PDF GRCz10/danRer10
DCD005143DT: LOG GRCz10/danRer10
DCD005156DT: BAM GRCz10/danRer10
DCD008437DT: BIGWIG GRCz10/danRer10
DCD008438DT: BIGWIG GRCz10/danRer10
DCD012704DT: LOG GRCz11/danRer11
DCD012705DT: BAM GRCz11/danRer11
DCD012706DT: TSV GRCz11/danRer11
DCD012707DT: TSV GRCz11/danRer11
DCD012708DT: BEDGRAPH GRCz11/danRer11
DCD012709DT: BEDGRAPH GRCz11/danRer11
DCD012710DT: BEDGRAPH GRCz11/danRer11
DCD012711DT: BEDGRAPH GRCz11/danRer11
DCD012712DT: BIGWIG GRCz11/danRer11
DCD012713DT: BIGWIG GRCz11/danRer11
DCD012714DT: LOG GRCz11/danRer11
DCD012715DT: PDF GRCz11/danRer11
DCD012716DT: LOG GRCz11/danRer11
DCD012717DT: PDF GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006874BS DCD000324SR whole organism Busch-Nentwich Lab, Wellcome Trust Sanger Institute HLF 50%-epiboly 5.25
Applied Assay ID Biosample Replicate Assay
DCD001843AA DCD013299BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002182SQ DCD002176TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004659DT: FASTQ
DCD005613DT: LOG GRCz10/danRer10
DCD005614DT: TSV GRCz10/danRer10
DCD005615DT: BEDGRAPH GRCz10/danRer10
DCD005616DT: BEDGRAPH GRCz10/danRer10
DCD005617DT: BEDGRAPH GRCz10/danRer10
DCD005618DT: BEDGRAPH GRCz10/danRer10
DCD005619DT: PDF GRCz10/danRer10
DCD005620DT: BEDGRAPH GRCz10/danRer10
DCD005621DT: LOG GRCz10/danRer10
DCD005622DT: LOG GRCz10/danRer10
DCD005623DT: PDF GRCz10/danRer10
DCD005636DT: BAM GRCz10/danRer10
DCD008356DT: BIGWIG GRCz10/danRer10
DCD008357DT: BIGWIG GRCz10/danRer10
DCD011822DT: LOG GRCz11/danRer11
DCD011823DT: TSV GRCz11/danRer11
DCD011824DT: BAM GRCz11/danRer11
DCD011825DT: TSV GRCz11/danRer11
DCD011826DT: BEDGRAPH GRCz11/danRer11
DCD011827DT: BEDGRAPH GRCz11/danRer11
DCD011828DT: BEDGRAPH GRCz11/danRer11
DCD011829DT: BEDGRAPH GRCz11/danRer11
DCD011830DT: BIGWIG GRCz11/danRer11
DCD011831DT: LOG GRCz11/danRer11
DCD011832DT: PDF GRCz11/danRer11
DCD011833DT: BIGWIG GRCz11/danRer11
DCD011834DT: LOG GRCz11/danRer11
DCD011835DT: PDF GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001813AA DCD013300BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002184SQ DCD002164TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004658DT: FASTQ
DCD005624DT: LOG GRCz10/danRer10
DCD005626DT: BEDGRAPH GRCz10/danRer10
DCD005627DT: TSV GRCz10/danRer10
DCD005628DT: BEDGRAPH GRCz10/danRer10
DCD005629DT: BEDGRAPH GRCz10/danRer10
DCD005630DT: BEDGRAPH GRCz10/danRer10
DCD005631DT: BEDGRAPH GRCz10/danRer10
DCD005632DT: LOG GRCz10/danRer10
DCD005633DT: PDF GRCz10/danRer10
DCD005634DT: PDF GRCz10/danRer10
DCD005635DT: LOG GRCz10/danRer10
DCD005646DT: BAM GRCz10/danRer10
DCD008362DT: BIGWIG GRCz10/danRer10
DCD008365DT: BIGWIG GRCz10/danRer10
DCD011849DT: LOG GRCz11/danRer11
DCD011851DT: BAM GRCz11/danRer11
DCD011852DT: TSV GRCz11/danRer11
DCD011853DT: TSV GRCz11/danRer11
DCD011854DT: BEDGRAPH GRCz11/danRer11
DCD011855DT: BEDGRAPH GRCz11/danRer11
DCD011856DT: BEDGRAPH GRCz11/danRer11
DCD011857DT: BEDGRAPH GRCz11/danRer11
DCD011858DT: BIGWIG GRCz11/danRer11
DCD011859DT: BIGWIG GRCz11/danRer11
DCD011860DT: PDF GRCz11/danRer11
DCD011861DT: LOG GRCz11/danRer11
DCD011862DT: PDF GRCz11/danRer11
DCD011863DT: LOG GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001849AA DCD013301BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002234SQ DCD002175TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004661DT: FASTQ
DCD004940DT: LOG GRCz10/danRer10
DCD004941DT: TSV GRCz10/danRer10
DCD004942DT: BEDGRAPH GRCz10/danRer10
DCD004944DT: BEDGRAPH GRCz10/danRer10
DCD004945DT: BEDGRAPH GRCz10/danRer10
DCD004946DT: BEDGRAPH GRCz10/danRer10
DCD004947DT: PDF GRCz10/danRer10
DCD004948DT: LOG GRCz10/danRer10
DCD004949DT: BEDGRAPH GRCz10/danRer10
DCD004950DT: PDF GRCz10/danRer10
DCD004951DT: LOG GRCz10/danRer10
DCD004964DT: BAM GRCz10/danRer10
DCD008470DT: BIGWIG GRCz10/danRer10
DCD008473DT: BIGWIG GRCz10/danRer10
DCD012550DT: LOG GRCz11/danRer11
DCD012551DT: TSV GRCz11/danRer11
DCD012552DT: TSV GRCz11/danRer11
DCD012553DT: BAM GRCz11/danRer11
DCD012554DT: BEDGRAPH GRCz11/danRer11
DCD012555DT: BEDGRAPH GRCz11/danRer11
DCD012556DT: BIGWIG GRCz11/danRer11
DCD012557DT: BEDGRAPH GRCz11/danRer11
DCD012558DT: BEDGRAPH GRCz11/danRer11
DCD012559DT: BIGWIG GRCz11/danRer11
DCD012560DT: LOG GRCz11/danRer11
DCD012561DT: PDF GRCz11/danRer11
DCD012562DT: LOG GRCz11/danRer11
DCD012563DT: PDF GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001844AA DCD013302BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002183SQ DCD002195TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004660DT: FASTQ
DCD005432DT: LOG GRCz10/danRer10
DCD005434DT: BEDGRAPH GRCz10/danRer10
DCD005435DT: TSV GRCz10/danRer10
DCD005436DT: BEDGRAPH GRCz10/danRer10
DCD005437DT: BEDGRAPH GRCz10/danRer10
DCD005438DT: BEDGRAPH GRCz10/danRer10
DCD005439DT: PDF GRCz10/danRer10
DCD005440DT: LOG GRCz10/danRer10
DCD005441DT: BEDGRAPH GRCz10/danRer10
DCD005443DT: PDF GRCz10/danRer10
DCD005444DT: LOG GRCz10/danRer10
DCD005457DT: BAM GRCz10/danRer10
DCD008398DT: BIGWIG GRCz10/danRer10
DCD008399DT: BIGWIG GRCz10/danRer10
DCD011836DT: BAM GRCz11/danRer11
DCD011837DT: LOG GRCz11/danRer11
DCD011838DT: TSV GRCz11/danRer11
DCD011839DT: TSV GRCz11/danRer11
DCD011840DT: BEDGRAPH GRCz11/danRer11
DCD011841DT: BEDGRAPH GRCz11/danRer11
DCD011842DT: BEDGRAPH GRCz11/danRer11
DCD011843DT: BIGWIG GRCz11/danRer11
DCD011844DT: BIGWIG GRCz11/danRer11
DCD011845DT: BEDGRAPH GRCz11/danRer11
DCD011846DT: LOG GRCz11/danRer11
DCD011847DT: PDF GRCz11/danRer11
DCD011848DT: PDF GRCz11/danRer11
DCD011850DT: LOG GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001850AA DCD013303BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002235SQ DCD002216TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004662DT: FASTQ
DCD005253DT: LOG GRCz10/danRer10
DCD005254DT: TSV GRCz10/danRer10
DCD005255DT: BEDGRAPH GRCz10/danRer10
DCD005256DT: BEDGRAPH GRCz10/danRer10
DCD005257DT: BEDGRAPH GRCz10/danRer10
DCD005258DT: PDF GRCz10/danRer10
DCD005260DT: BEDGRAPH GRCz10/danRer10
DCD005261DT: LOG GRCz10/danRer10
DCD005262DT: BEDGRAPH GRCz10/danRer10
DCD005263DT: LOG GRCz10/danRer10
DCD005264DT: PDF GRCz10/danRer10
DCD005278DT: BAM GRCz10/danRer10
DCD008410DT: BIGWIG GRCz10/danRer10
DCD008412DT: BIGWIG GRCz10/danRer10
DCD012564DT: LOG GRCz11/danRer11
DCD012565DT: BAM GRCz11/danRer11
DCD012566DT: TSV GRCz11/danRer11
DCD012567DT: TSV GRCz11/danRer11
DCD012568DT: BEDGRAPH GRCz11/danRer11
DCD012569DT: BEDGRAPH GRCz11/danRer11
DCD012570DT: BEDGRAPH GRCz11/danRer11
DCD012571DT: BEDGRAPH GRCz11/danRer11
DCD012572DT: BIGWIG GRCz11/danRer11
DCD012573DT: BIGWIG GRCz11/danRer11
DCD012574DT: LOG GRCz11/danRer11
DCD012575DT: PDF GRCz11/danRer11
DCD012576DT: LOG GRCz11/danRer11
DCD012577DT: PDF GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006875BS DCD000324SR whole organism Busch-Nentwich Lab, Wellcome Trust Sanger Institute HLF Shield 6
Applied Assay ID Biosample Replicate Assay
DCD001810AA DCD013369BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002177SQ DCD002178TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004653DT: FASTQ
DCD005288DT: LOG GRCz10/danRer10
DCD005289DT: TSV GRCz10/danRer10
DCD005290DT: BEDGRAPH GRCz10/danRer10
DCD005292DT: BEDGRAPH GRCz10/danRer10
DCD005294DT: PDF GRCz10/danRer10
DCD005295DT: BEDGRAPH GRCz10/danRer10
DCD005296DT: BEDGRAPH GRCz10/danRer10
DCD005297DT: LOG GRCz10/danRer10
DCD005298DT: BEDGRAPH GRCz10/danRer10
DCD005299DT: PDF GRCz10/danRer10
DCD005300DT: LOG GRCz10/danRer10
DCD005312DT: BAM GRCz10/danRer10
DCD008423DT: BIGWIG GRCz10/danRer10
DCD008427DT: BIGWIG GRCz10/danRer10
DCD011752DT: LOG GRCz11/danRer11
DCD011753DT: TSV GRCz11/danRer11
DCD011754DT: TSV GRCz11/danRer11
DCD011755DT: BAM GRCz11/danRer11
DCD011756DT: BEDGRAPH GRCz11/danRer11
DCD011757DT: BEDGRAPH GRCz11/danRer11
DCD011758DT: BIGWIG GRCz11/danRer11
DCD011759DT: BEDGRAPH GRCz11/danRer11
DCD011760DT: BEDGRAPH GRCz11/danRer11
DCD011761DT: BIGWIG GRCz11/danRer11
DCD011762DT: LOG GRCz11/danRer11
DCD011763DT: PDF GRCz11/danRer11
DCD011764DT: LOG GRCz11/danRer11
DCD011765DT: PDF GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001809AA DCD013370BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002181SQ DCD002148TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004654DT: FASTQ
DCD005565DT: LOG GRCz10/danRer10
DCD005566DT: TSV GRCz10/danRer10
DCD005567DT: BEDGRAPH GRCz10/danRer10
DCD005568DT: BEDGRAPH GRCz10/danRer10
DCD005569DT: BEDGRAPH GRCz10/danRer10
DCD005570DT: BEDGRAPH GRCz10/danRer10
DCD005571DT: PDF GRCz10/danRer10
DCD005572DT: BEDGRAPH GRCz10/danRer10
DCD005573DT: LOG GRCz10/danRer10
DCD005575DT: PDF GRCz10/danRer10
DCD005576DT: LOG GRCz10/danRer10
DCD005591DT: BAM GRCz10/danRer10
DCD008363DT: BIGWIG GRCz10/danRer10
DCD008367DT: BIGWIG GRCz10/danRer10
DCD011808DT: LOG GRCz11/danRer11
DCD011809DT: BAM GRCz11/danRer11
DCD011810DT: TSV GRCz11/danRer11
DCD011811DT: TSV GRCz11/danRer11
DCD011812DT: BEDGRAPH GRCz11/danRer11
DCD011813DT: BEDGRAPH GRCz11/danRer11
DCD011814DT: BEDGRAPH GRCz11/danRer11
DCD011815DT: BEDGRAPH GRCz11/danRer11
DCD011816DT: PDF GRCz11/danRer11
DCD011817DT: BIGWIG GRCz11/danRer11
DCD011818DT: BIGWIG GRCz11/danRer11
DCD011819DT: LOG GRCz11/danRer11
DCD011820DT: LOG GRCz11/danRer11
DCD011821DT: PDF GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001816AA DCD013371BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002222SQ DCD002168TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004655DT: FASTQ
DCD005362DT: LOG GRCz10/danRer10
DCD005363DT: TSV GRCz10/danRer10
DCD005364DT: BEDGRAPH GRCz10/danRer10
DCD005365DT: PDF GRCz10/danRer10
DCD005366DT: BEDGRAPH GRCz10/danRer10
DCD005367DT: BEDGRAPH GRCz10/danRer10
DCD005368DT: BEDGRAPH GRCz10/danRer10
DCD005369DT: LOG GRCz10/danRer10
DCD005370DT: PDF GRCz10/danRer10
DCD005371DT: BEDGRAPH GRCz10/danRer10
DCD005372DT: LOG GRCz10/danRer10
DCD005387DT: BAM GRCz10/danRer10
DCD008400DT: BIGWIG GRCz10/danRer10
DCD008402DT: BIGWIG GRCz10/danRer10
DCD012382DT: BAM GRCz11/danRer11
DCD012383DT: LOG GRCz11/danRer11
DCD012384DT: TSV GRCz11/danRer11
DCD012385DT: TSV GRCz11/danRer11
DCD012386DT: BEDGRAPH GRCz11/danRer11
DCD012387DT: BEDGRAPH GRCz11/danRer11
DCD012388DT: BEDGRAPH GRCz11/danRer11
DCD012389DT: PDF GRCz11/danRer11
DCD012390DT: BIGWIG GRCz11/danRer11
DCD012391DT: BIGWIG GRCz11/danRer11
DCD012392DT: BEDGRAPH GRCz11/danRer11
DCD012393DT: LOG GRCz11/danRer11
DCD012394DT: PDF GRCz11/danRer11
DCD012396DT: LOG GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001815AA DCD013372BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002209SQ DCD002145TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004656DT: FASTQ
DCD005769DT: LOG GRCz10/danRer10
DCD005770DT: TSV GRCz10/danRer10
DCD005771DT: BEDGRAPH GRCz10/danRer10
DCD005772DT: BEDGRAPH GRCz10/danRer10
DCD005773DT: BEDGRAPH GRCz10/danRer10
DCD005774DT: BEDGRAPH GRCz10/danRer10
DCD005775DT: BEDGRAPH GRCz10/danRer10
DCD005776DT: LOG GRCz10/danRer10
DCD005777DT: PDF GRCz10/danRer10
DCD005778DT: PDF GRCz10/danRer10
DCD005779DT: LOG GRCz10/danRer10
DCD005787DT: BAM GRCz10/danRer10
DCD008344DT: BIGWIG GRCz10/danRer10
DCD008345DT: BIGWIG GRCz10/danRer10
DCD012198DT: LOG GRCz11/danRer11
DCD012201DT: TSV GRCz11/danRer11
DCD012202DT: BAM GRCz11/danRer11
DCD012203DT: TSV GRCz11/danRer11
DCD012204DT: BEDGRAPH GRCz11/danRer11
DCD012205DT: BEDGRAPH GRCz11/danRer11
DCD012206DT: BEDGRAPH GRCz11/danRer11
DCD012207DT: BEDGRAPH GRCz11/danRer11
DCD012208DT: BIGWIG GRCz11/danRer11
DCD012209DT: BIGWIG GRCz11/danRer11
DCD012210DT: LOG GRCz11/danRer11
DCD012211DT: LOG GRCz11/danRer11
DCD012212DT: PDF GRCz11/danRer11
DCD012213DT: PDF GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001814AA DCD013373BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002178SQ DCD002179TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004657DT: FASTQ
DCD005829DT: LOG GRCz10/danRer10
DCD005830DT: BEDGRAPH GRCz10/danRer10
DCD005831DT: TSV GRCz10/danRer10
DCD005832DT: BEDGRAPH GRCz10/danRer10
DCD005833DT: BEDGRAPH GRCz10/danRer10
DCD005834DT: PDF GRCz10/danRer10
DCD005835DT: LOG GRCz10/danRer10
DCD005836DT: PDF GRCz10/danRer10
DCD005838DT: LOG GRCz10/danRer10
DCD005841DT: BEDGRAPH GRCz10/danRer10
DCD005842DT: BEDGRAPH GRCz10/danRer10
DCD005844DT: BAM GRCz10/danRer10
DCD008327DT: BIGWIG GRCz10/danRer10
DCD008330DT: BIGWIG GRCz10/danRer10
DCD011766DT: BAM GRCz11/danRer11
DCD011767DT: LOG GRCz11/danRer11
DCD011768DT: TSV GRCz11/danRer11
DCD011769DT: TSV GRCz11/danRer11
DCD011770DT: BEDGRAPH GRCz11/danRer11
DCD011771DT: BEDGRAPH GRCz11/danRer11
DCD011772DT: BEDGRAPH GRCz11/danRer11
DCD011773DT: BEDGRAPH GRCz11/danRer11
DCD011774DT: BIGWIG GRCz11/danRer11
DCD011775DT: BIGWIG GRCz11/danRer11
DCD011776DT: LOG GRCz11/danRer11
DCD011777DT: PDF GRCz11/danRer11
DCD011778DT: LOG GRCz11/danRer11
DCD011779DT: PDF GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006876BS DCD000324SR whole organism Busch-Nentwich Lab, Wellcome Trust Sanger Institute HLF 1k-cell 3
Applied Assay ID Biosample Replicate Assay
DCD001788AA DCD013384BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002174SQ DCD002191TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004672DT: FASTQ
DCD005397DT: LOG GRCz10/danRer10
DCD005398DT: TSV GRCz10/danRer10
DCD005399DT: BEDGRAPH GRCz10/danRer10
DCD005400DT: BEDGRAPH GRCz10/danRer10
DCD005401DT: PDF GRCz10/danRer10
DCD005402DT: BEDGRAPH GRCz10/danRer10
DCD005403DT: BEDGRAPH GRCz10/danRer10
DCD005404DT: BEDGRAPH GRCz10/danRer10
DCD005405DT: LOG GRCz10/danRer10
DCD005406DT: LOG GRCz10/danRer10
DCD005407DT: PDF GRCz10/danRer10
DCD005421DT: BAM GRCz10/danRer10
DCD008401DT: BIGWIG GRCz10/danRer10
DCD008403DT: BIGWIG GRCz10/danRer10
DCD011710DT: LOG GRCz11/danRer11
DCD011711DT: TSV GRCz11/danRer11
DCD011712DT: TSV GRCz11/danRer11
DCD011713DT: BEDGRAPH GRCz11/danRer11
DCD011714DT: BAM GRCz11/danRer11
DCD011715DT: BEDGRAPH GRCz11/danRer11
DCD011716DT: BEDGRAPH GRCz11/danRer11
DCD011717DT: PDF GRCz11/danRer11
DCD011718DT: BIGWIG GRCz11/danRer11
DCD011719DT: BIGWIG GRCz11/danRer11
DCD011720DT: BEDGRAPH GRCz11/danRer11
DCD011721DT: LOG GRCz11/danRer11
DCD011722DT: PDF GRCz11/danRer11
DCD011724DT: LOG GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001789AA DCD013385BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002219SQ DCD002218TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004671DT: FASTQ
DCD005696DT: LOG GRCz10/danRer10
DCD005697DT: TSV GRCz10/danRer10
DCD005699DT: BEDGRAPH GRCz10/danRer10
DCD005700DT: BEDGRAPH GRCz10/danRer10
DCD005701DT: BEDGRAPH GRCz10/danRer10
DCD005702DT: BEDGRAPH GRCz10/danRer10
DCD005703DT: LOG GRCz10/danRer10
DCD005704DT: PDF GRCz10/danRer10
DCD005705DT: BEDGRAPH GRCz10/danRer10
DCD005706DT: PDF GRCz10/danRer10
DCD005707DT: LOG GRCz10/danRer10
DCD005723DT: BAM GRCz10/danRer10
DCD008334DT: BIGWIG GRCz10/danRer10
DCD008335DT: BIGWIG GRCz10/danRer10
DCD012340DT: BAM GRCz11/danRer11
DCD012341DT: LOG GRCz11/danRer11
DCD012342DT: TSV GRCz11/danRer11
DCD012343DT: TSV GRCz11/danRer11
DCD012344DT: BEDGRAPH GRCz11/danRer11
DCD012345DT: BEDGRAPH GRCz11/danRer11
DCD012346DT: BEDGRAPH GRCz11/danRer11
DCD012347DT: LOG GRCz11/danRer11
DCD012348DT: PDF GRCz11/danRer11
DCD012349DT: BIGWIG GRCz11/danRer11
DCD012350DT: BIGWIG GRCz11/danRer11
DCD012351DT: BEDGRAPH GRCz11/danRer11
DCD012352DT: PDF GRCz11/danRer11
DCD012353DT: LOG GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001876AA DCD013386BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002227SQ DCD002182TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004670DT: FASTQ
DCD005913DT: LOG GRCz10/danRer10
DCD005914DT: TSV GRCz10/danRer10
DCD005915DT: BEDGRAPH GRCz10/danRer10
DCD005916DT: BEDGRAPH GRCz10/danRer10
DCD005917DT: BEDGRAPH GRCz10/danRer10
DCD005918DT: BEDGRAPH GRCz10/danRer10
DCD005919DT: BEDGRAPH GRCz10/danRer10
DCD005920DT: PDF GRCz10/danRer10
DCD005921DT: LOG GRCz10/danRer10
DCD005922DT: PDF GRCz10/danRer10
DCD005923DT: LOG GRCz10/danRer10
DCD005936DT: BAM GRCz10/danRer10
DCD008323DT: BIGWIG GRCz10/danRer10
DCD008324DT: BIGWIG GRCz10/danRer10
DCD012452DT: LOG GRCz11/danRer11
DCD012453DT: BAM GRCz11/danRer11
DCD012454DT: TSV GRCz11/danRer11
DCD012455DT: TSV GRCz11/danRer11
DCD012456DT: BEDGRAPH GRCz11/danRer11
DCD012457DT: BEDGRAPH GRCz11/danRer11
DCD012458DT: BEDGRAPH GRCz11/danRer11
DCD012459DT: BEDGRAPH GRCz11/danRer11
DCD012460DT: BIGWIG GRCz11/danRer11
DCD012461DT: LOG GRCz11/danRer11
DCD012462DT: PDF GRCz11/danRer11
DCD012463DT: BIGWIG GRCz11/danRer11
DCD012464DT: LOG GRCz11/danRer11
DCD012465DT: PDF GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001787AA DCD013387BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002163SQ DCD002169TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004669DT: FASTQ
DCD005888DT: LOG GRCz10/danRer10
DCD005889DT: BEDGRAPH GRCz10/danRer10
DCD005890DT: TSV GRCz10/danRer10
DCD005891DT: BEDGRAPH GRCz10/danRer10
DCD005892DT: BEDGRAPH GRCz10/danRer10
DCD005893DT: BEDGRAPH GRCz10/danRer10
DCD005895DT: PDF GRCz10/danRer10
DCD005896DT: LOG GRCz10/danRer10
DCD005897DT: BEDGRAPH GRCz10/danRer10
DCD005898DT: PDF GRCz10/danRer10
DCD005899DT: LOG GRCz10/danRer10
DCD005910DT: BAM GRCz10/danRer10
DCD008310DT: BIGWIG GRCz10/danRer10
DCD008311DT: BIGWIG GRCz10/danRer10
DCD011555DT: LOG GRCz11/danRer11
DCD011557DT: TSV GRCz11/danRer11
DCD011558DT: BAM GRCz11/danRer11
DCD011559DT: TSV GRCz11/danRer11
DCD011560DT: BEDGRAPH GRCz11/danRer11
DCD011561DT: BEDGRAPH GRCz11/danRer11
DCD011562DT: BEDGRAPH GRCz11/danRer11
DCD011563DT: BEDGRAPH GRCz11/danRer11
DCD011564DT: BIGWIG GRCz11/danRer11
DCD011565DT: BIGWIG GRCz11/danRer11
DCD011566DT: LOG GRCz11/danRer11
DCD011567DT: LOG GRCz11/danRer11
DCD011568DT: PDF GRCz11/danRer11
DCD011569DT: PDF GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD001848AA DCD013388BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002193SQ DCD002158TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004668DT: FASTQ
DCD005937DT: LOG GRCz10/danRer10
DCD005938DT: BEDGRAPH GRCz10/danRer10
DCD005939DT: TSV GRCz10/danRer10
DCD005941DT: BEDGRAPH GRCz10/danRer10
DCD005942DT: BEDGRAPH GRCz10/danRer10
DCD005943DT: BEDGRAPH GRCz10/danRer10
DCD005944DT: PDF GRCz10/danRer10
DCD005945DT: BEDGRAPH GRCz10/danRer10
DCD005946DT: LOG GRCz10/danRer10
DCD005947DT: PDF GRCz10/danRer10
DCD005948DT: LOG GRCz10/danRer10
DCD005960DT: BAM GRCz10/danRer10
DCD008315DT: BIGWIG GRCz10/danRer10
DCD008316DT: BIGWIG GRCz10/danRer10
DCD011976DT: BAM GRCz11/danRer11
DCD011977DT: LOG GRCz11/danRer11
DCD011978DT: TSV GRCz11/danRer11
DCD011979DT: TSV GRCz11/danRer11
DCD011980DT: BEDGRAPH GRCz11/danRer11
DCD011981DT: BEDGRAPH GRCz11/danRer11
DCD011982DT: BEDGRAPH GRCz11/danRer11
DCD011983DT: LOG GRCz11/danRer11
DCD011984DT: PDF GRCz11/danRer11
DCD011985DT: BIGWIG GRCz11/danRer11
DCD011986DT: BIGWIG GRCz11/danRer11
DCD011987DT: BEDGRAPH GRCz11/danRer11
DCD011988DT: PDF GRCz11/danRer11
DCD011990DT: LOG GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Hours Post Fertilization
DCD006877BS DCD000324SR whole organism Busch-Nentwich Lab, Wellcome Trust Sanger Institute HLF Dome 4.33
Applied Assay ID Biosample Replicate Assay
DCD001847AA DCD013364BR RNA-seq_Busch-Nentwich_Lab_0003AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Maximum Read Length Sequencing Date
DCD002242SQ DCD002172TR Busch-Nentwich Lab, Wellcome Trust Sanger Institute Illumina HiSeq 2500 200 06/06/2016
DCD004667DT: FASTQ
DCD005229DT: LOG GRCz10/danRer10