3P-seq tracks
This is a 3P-seq super track that groups together signal (bigWig format) and
tag clusters of transription end site (TES) (bigBed format). These tracks were produced by the DANIO-CODE 3P-seq pipeline.
- The DANIO-CODE 3P-seq pipeline consists of 5 steps:
- #.Step 1. Filter raw data
#.Step 2. Quality Control (FastQC)
#.Step 3. Mapping to reference genome (Bowtie)
#.Step 4. Obtaining Transcription End Sites (TES) from 3P-seq data
#.Step 5. Generating Tag Clusters of TES (Paraclu-9)
- Track definition:
- 3P-seq tracks consist of 2 parts:
#. 3P-seq TES signals
#. and 3P-seq tag clusters of TES
For more information on how the data were processed, please refer here <https://gitlab.com/danio-code/DANIO-CODE_3P-seq>.