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Assay summary for ATAC-seq_Zon_Lab_0002AS
Assay Type:
ATAC-seq
Lab:
Zon Lab, Boston Children's Hospital
Description:
Zebrafish melanoma cell lines were grown to 80% confluence, trypsinized, counted, and 50,000 cells were lysed and subjected to “tagmentation” reaction and library construction as described in (30). Libraries were run on an Illumina Hi-Seq2000.
Added by User:
syang
Date Added:
June 2, 2016, 3:02 p.m.
Last Edited:
Aug. 20, 2018, 2:07 a.m.
Applied in Series
DCD000207SR:
A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation [zebrafish ChIP-seq, ATAC-seq, RNA-seq]
Applied on Biosamples
DCD006548BS
whole organism from Zon Lab, Boston Children's Hospital
DCD006552BS
cell line from Zon Lab, Boston Children's Hospital
DCD006554BS
cell line from Zon Lab, Boston Children's Hospital
DCD006551BS
whole organism from Zon Lab, Boston Children's Hospital
DCD006553BS
cell line from Zon Lab, Boston Children's Hospital
DCD006550BS
cell line from Zon Lab, Boston Children's Hospital