Data summary for DCD015944DT from sequencing run DCD002479SQ

LOG

GRCz11/danRer11

DANIO-CODE_RNA-Seq_ver_1.2|STAR_2.6.1b: /STAR --alignSJoverhangMin 15 --genomeDir genome --outFilterMismatchNmax 33 --outSAMstrandField intronMotif --outFilterMatchNminOverLread 0 --outSAMattributes NH HI AS NM MD --outSAMunmapped Within --outFilterScoreMinOverLread 0.3 --outFileNamePrefix ~/outputs/ --quantMode GeneCounts --seedSearchStartLmax 12 --outSAMtype BAM SortedByCoordinate --runThreadN 16 --limitBAMsortRAM 300000000000 --limitOutSJcollapsed 2000000 --readFilesIn RNA-seq_Wong_lab_0001AS.DCD002479SQ.USERmickael.dong.R1.fastq --genomeLoad NoSharedMemory --outFilterType BySJout --outWigType bedGraph --outWigStrand Unstranded

freeze-03

ak.mukarram

Oct. 23, 2018, 12:49 a.m.

Nov. 28, 2018, 2:07 a.m.

This data is part of series

  • DCD000392SR titled RNA-seq of brain for 4 different strains: Neurotranscriptome profiles of four zebrafish strains