Loss of function of myosin chaperones triggers Hsf1-mediated transcriptional response in skeletal muscle cells
Case Control
10.1186/s13059-015-0825-8
GSE74202
A functional study using mRNA-seq to understand the mechanism underlying myopathy phenotype under unc45b and Hsp90 mutation
True
vgourain
Sept. 19, 2016, 6:07 a.m.
Oct. 22, 2018, 6:22 p.m.
| Biosample ID | Series | biosample_type | biosample_lab | genetic_background | stage | Hours Post Fertilization |
|---|---|---|---|---|---|---|
| DCD006708BS | DCD000247SR | whole organism | Strahle Lab, Karlsruhe Institute of Technology | AB | Day 5 | 120 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001469AA | DCD012967BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001561SQ | DCD001501TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 04/01/2015 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001470AA | DCD012969BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001549SQ | DCD001499TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 04/01/2015 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001472AA | DCD012978BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001550SQ | DCD001503TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 04/01/2015 |
| Biosample ID | Series | biosample_type | biosample_lab | genetic_background | stage | Hours Post Fertilization |
|---|---|---|---|---|---|---|
| DCD006709BS | DCD000247SR | whole organism | Strahle Lab, Karlsruhe Institute of Technology | AB | Day 5 | 120 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001468AA | DCD012979BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001553SQ | DCD001497TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 04/01/2015 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001467AA | DCD012980BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001557SQ | DCD001508TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 04/01/2015 |
| Biosample ID | Series | biosample_type | biosample_lab | genetic_background | stage | Hours Post Fertilization |
|---|---|---|---|---|---|---|
| DCD006710BS | DCD000247SR | whole organism | Strahle Lab, Karlsruhe Institute of Technology | AB | Protruding-mouth | 72 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001473AA | DCD012983BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001551SQ | DCD001504TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 11/18/2013 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001476AA | DCD012984BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001565SQ | DCD001493TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 11/18/2013 |
| Biosample ID | Series | biosample_type | biosample_lab | genetic_background | stage | Hours Post Fertilization |
|---|---|---|---|---|---|---|
| DCD006711BS | DCD000247SR | whole organism | Strahle Lab, Karlsruhe Institute of Technology | AB | Day 5 | 120 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001471AA | DCD012981BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001556SQ | DCD001505TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 04/01/2015 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001474AA | DCD012982BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001552SQ | DCD001507TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 04/01/2015 |
| Biosample ID | Series | biosample_type | biosample_lab | genetic_background | stage | Hours Post Fertilization |
|---|---|---|---|---|---|---|
| DCD006712BS | DCD000247SR | whole organism | Strahle Lab, Karlsruhe Institute of Technology | AB | 20-25 somites | 24 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001480AA | DCD012974BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001554SQ | DCD001498TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 01/09/2013 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001477AA | DCD012975BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001560SQ | DCD001509TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 01/09/2013 |
| Biosample ID | Series | biosample_type | biosample_lab | genetic_background | stage | Hours Post Fertilization |
|---|---|---|---|---|---|---|
| DCD006713BS | DCD000247SR | whole organism | Strahle Lab, Karlsruhe Institute of Technology | AB | Long-pec | 48 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001478AA | DCD012963BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001555SQ | DCD001510TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 11/18/2013 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001475AA | DCD012971BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001564SQ | DCD001496TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 11/18/2013 |
| Biosample ID | Series | biosample_type | biosample_lab | genetic_background | stage | Hours Post Fertilization |
|---|---|---|---|---|---|---|
| DCD006714BS | DCD000247SR | whole organism | Strahle Lab, Karlsruhe Institute of Technology | AB | Long-pec | 48 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001484AA | DCD012972BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001558SQ | DCD001490TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 11/18/2013 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001481AA | DCD012973BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001546SQ | DCD001491TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 11/18/2013 |
| Biosample ID | Series | biosample_type | biosample_lab | genetic_background | stage | Hours Post Fertilization |
|---|---|---|---|---|---|---|
| DCD006715BS | DCD000247SR | whole organism | Strahle Lab, Karlsruhe Institute of Technology | AB | Protruding-mouth | 72 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001479AA | DCD012976BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001545SQ | DCD001495TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 11/18/2013 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001482AA | DCD012977BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001547SQ | DCD001492TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 11/18/2013 |
| Biosample ID | Series | biosample_type | biosample_lab | genetic_background | stage | Hours Post Fertilization |
|---|---|---|---|---|---|---|
| DCD006716BS | DCD000247SR | whole organism | Strahle Lab, Karlsruhe Institute of Technology | AB | 20-25 somites | 24 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001485AA | DCD012968BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001559SQ | DCD001494TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 01/09/2013 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001483AA | DCD012970BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001548SQ | DCD001489TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 01/09/2013 |
| Biosample ID | Series | biosample_type | biosample_lab | genetic_background | stage | Hours Post Fertilization |
|---|---|---|---|---|---|---|
| DCD006717BS | DCD000247SR | whole organism | Strahle Lab, Karlsruhe Institute of Technology | AB | Day 5 | 120 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001486AA | DCD012964BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001562SQ | DCD001500TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 04/01/2015 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001487AA | DCD012965BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001566SQ | DCD001502TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 04/01/2015 |
| Applied Assay ID | Biosample Replicate | Assay |
|---|---|---|
| DCD001488AA | DCD012966BR | RNA-seq_Strahle_Lab_0005AS |
| Sequencing ID | Technical Replicate | Sequencing Lab | Platform | Instrument | Maximum Read Length | Sequencing Date |
|---|---|---|---|---|---|---|
| DCD001563SQ | DCD001506TR | Strahle Lab, Karlsruhe Institute of Technology | Illumina | HiSeq 2000 | 50 | 04/01/2015 |