Tracks are grouped together based on assay. When possible, regions of enrichment are generated and showed (ChIP-seq and ATAC-seq peaks, CAGE-seq tag clusters and methylation level of cytosines in each context for BS-seq).
Inside assay type composites, the tracks are organised in subgroups based on developmental stages. This enables all tracks from the same stages to be shown in bulk. Tracks are by default ordered based on developmental time course. BS-seq and ChIP-seq have additional grouping, corresponding to cytosine context and ChIP-seq target respectively.
The tracks are named and labeled according to their respective DANIO-CODE DCC sequencing id. The long label shown above the track in the browser represent the developmental stage, group which generated the data, tissue, and geo/sra reference number. Missing information are represented by `nan`. Futher information about how the tracks were generated can be found on each composite page.
There are two different data types you can download, annotation and sequencing data.
The annotation data are provided as csv files, which follow the terms of the annotation system.
You can either download it using the data export tool and clicking "Download annotation" or from the details page of a series.
The sequencing/processed files can be downloaded either using the data export tool, the individual download buttons on the series details page or via the URLs provided in the annotation csv files.
The following information is needed for each biosample and its replicates
The following information is needed for each assay.
The following information is needed for each biosample-assay pair.
Only demultiplexed FASTQ files are allowed. Exactly one file per sequencing if it was one in single end mode and exactly two for paired end sequencing each with a web accessible URL to download the data from (entered in the fields described below). For large amounts of data, write to daniocode@gmail.com to request a preloading on the server.
The data annotation tool is available at danio-code.zfin.org. You need to create a user account to be able to view data. After a security check your account will have access to the annotation upload tools.
Data producers are requested to start gathering their metadata according to the nomenclatures listed below, and collect them in a format which will allow them to use CSV files during data annotation and batch annotation using the online DCC tool.
In addition to the web application annotation procedure, we have provided a batch CSV uploading procedure. This will be useful for users that have a large amount of data for which the web application may be cumbersome or error prone.
Batch uploads are accomplished using CSV files that describe the annotation details (series, biosamples, assays, sequences) and associated data files. CSV files can be created in excel and "saved as" any provided CSV format. CSV files can also be automatedly produced CSV file, but must adhere exactly to the guidelines below. This CSV file can be uploaded and processed through the batch upload page at danio-code.zfin.org.
An excel document with an example upload can be found at this link.
In order to use this as a batch upload csv file the first column must be removed and this file must be saved in any supported CSV format from excel.
You can find the an example of a correctly formated CSV file at this link.
If you open this file in excel please reformat the sequencing__sequencing_date to the correct date format (YYYY-MM-DD).
Each row of the uploaded CSV file can create new annotation records or work with references to already existing records via the DANIO-CODE id’s. Links between annotation records (i.e. that a biosample belongs to a series) are created between any annotation/data records on each line of the CSV file. Thus each row must contain columns describing the annotation details (series, biosample, assay, and sequencing) and the associated data. Once an annotation record has been entered on a line of the CSV file, all following lines may simply reference the interal_id field to link that record to several data files. If additional annotation record attributes are provided they must match those in the first record with that annotation record internal_id. The requirements for all annotation record attributes are listed below.
Unless otherwise noted fields may contain free text (most fields allow a maximum of 200 characters). Unless otherwise noted each field is required (unless a previous line has defined the annotation record attributes associated with this internal_id).
The header for the CSV files is strictly controlled to ensure correct annotation of each sample. Header fields for each attribute must match exactly the annotation record (series, biosample, assay, etc.) follow by two underscores (“__”) and the attribute name (internal_id, series_type, etc.). Thus the header field for a series id would be “series__series_id” and the header field for a biosample type would be “biosample__biosample_type”. Optional fields need not be included in the CSV file if this attribute will not be defined for any sample.
The following terms and their restrictions may change, please always check the most recent version of this document.
18 CAGE-seq libraries
24 ChIP-seq libraries (four out of them as mock IPs)
To each of the 42 libraries the following is assigned:
To each of the 66 data sets (18 CAGE-Seq and 48 ChIP-Seq) the following is assigned:
URL to each of the individual FASTQ files
An excel document with an example upload can be found at this link.
In order to use this as a batch upload csv file the first column must be removed and this file must be saved in any supported CSV format from excel.
You can find the an example of a correctly formated CSV file at this link.
If you open this file in excel please reformat the sequencing__sequencing_date to the correct date format (YYYY-MM-DD).
Name |
---|
with processed files |
initial entry |
complete upload |
Name |
---|
whole organism |
tissue |
stem cells |
cell line |
Name |
---|
zonule |
zone of polarizing activity pelvic fin bud |
zone of polarizing activity pectoral fin bud |
zona radiata |
zona limitans intrathalamica |
YSL |
yolk larval melanophore stripe |
yolk |
xanthophore |
xanthoblast |
whole organism |
white matter |
Weberian vertebra |
Weberian ossicle |
Weberian apparatus |
vpG2 |
vpG1 |
vmGy |
vmGx |
vmG7 |
vmG6 |
vmG5 |
vmG4 |
vmG3 |
vmG2 |
vmG1 |
vitreous |
visual system |
visual pigment cell (sensu Vertebrata) |
visible light photoreceptor cell |
viscerosensory commissural nucleus of Cajal |
visceromotor neuron |
visceromotor column |
visceral peritoneum |
visceral fat |
vH ionocyte |
vestibulo-spinal tract |
vestibulolateralis lobe |
vestibuloauditory system |
vertical myoseptum |
vertebral column |
vertebral artery |
vertebra 9 |
vertebra 8 |
vertebra 7 |
vertebra 6 - vertebra 7 joint |
vertebra 6 |
vertebra 5-vertebra 6 joint |
vertebra 5 |
vertebra 4-vertebra 5 joint |
vertebra 4 |
vertebra 3 |
vertebra 2 |
vertebra 12 |
vertebra 11 |
vertebra 10 |
vertebra 1 |
vertebra |
venule |
ventro-rostral cluster |
ventroposterior zone olfactory bulb |
ventromedial zone olfactory bulb |
ventromedial thalamic nucleus |
ventrolateral thalamic nucleus |
ventrolateral optic tract |
ventrolateral nucleus |
ventro-caudal cluster |
ventroanterior zone of olfactory bulb |
ventriculo bulbo valve |
ventricular zone |
ventricular system |
ventricular myocardium |
ventricular epicardium |
ventricular endocardium |
ventral zone olfactory bulb |
ventral wall of dorsal aorta |
ventral transverse |
ventral tooth row |
ventral thalamus nucleus |
ventral thalamus |
ventral telencephalon |
ventral sulcus |
ventral spinal nerve septal branch |
ventral spinal nerve median branch |
ventral spinal nerve |
ventral root |
ventral rhombencephalic commissure medulla oblongata |
ventral rhombencephalic commissure |
ventral rectus |
ventral proneural cluster |
ventral posterior glomerulus |
ventral pelvic arrector |
ventral oblique extraocular muscle |
ventral oblique branchial muscle |
ventral nucleus of ventral telencephalon |
ventral motor nucleus trigeminal nerve |
ventral mesoderm |
ventral mesentery |
ventral mesenchyme |
ventral mandibular arch |
ventral liver lobe |
ventral lateral mesoderm |
ventral larval melanophore stripe |
ventral intermandibularis posterior |
ventral intermandibularis anterior |
ventral interfilamental caudal muscle |
ventral hypothalamic zone |
ventral hypohyal-urohyal joint |
ventral hypohyal bone |
ventral hyoid arch |
ventral horn spinal cord |
ventral habenular nucleus |
ventral funiculus |
ventral fin fold |
ventral entopeduncular nucleus of ventral telencephalon |
ventral caudal adductor |
ventral canal eye |
ventral branch nasal ciliary artery |
ventral arrector |
ventral aorta |
ventral anterior lateral line nerve |
ventral anterior lateral line ganglion |
ventral actinotrichium |
ventral accessory optic nucleus |
vent |
VeLD |
vein |
vasculature |
vascular sprouts |
vascular smooth muscle |
vascular lymphangioblast |
vascular endothelium |
vascular cord |
vascular associated smooth muscle cell |
VaP motor neuron |
valvula cerebelli |
vagal sensory zone |
vagal root |
vagal placode 4 |
vagal placode 3 |
vagal placode 2 |
vagal placode 1 |
vagal neural crest |
vagal lobe |
vagal ganglion 4 |
vagal ganglion 3 |
vagal ganglion 2 |
vagal ganglion 1 |
vagal ganglion |
UV sensitive photoreceptor cell |
utriculosaccular foramen |
utricle |
urothelial cell |
urostyle |
uroneural |
urohyal |
urogenital papilla |
ural vertebra 2 |
ural centrum 2 |
upper right intestinal lymph vessel |
upper rhombic lip |
upper oral valve |
upper lip |
upper left intestinal lymph vessel |
unspecified |
unipolar neuron |
unilaminar epithelium |
unfertilized egg |
uncrossed tecto-bulbar tract |
ultimobranchial body |
UCoD |
tunica interna |
tunica externa |
trunk vasculature |
trunk sensory canal |
trunk neural crest cell |
trunk neural crest |
trunk musculature |
trunk mesenchyme |
trunk ganglion |
trunk |
trochlear motor nucleus |
tri-tipped trabecula |
tripus |
trigeminal sensory neuron |
trigeminal placode |
trigeminal neural crest |
trigeminal motor nucleus |
trigeminal ganglion |
transverse canal |
transverse band |
transitional stage B cell |
transitional epithelial cell |
trans-choroid plexus branch |
tract of the postoptic commissure |
tract of the caudal commissure |
trabecular layer of ventricle |
trabecular layer of the atrium |
trabecular layer |
trabecula cranii |
trabecula communis |
totipotent stem cell |
torus semicircularis |
torus longitudinalis |
torus lateralis |
tooth row |
tooth pulp |
tooth placode |
tooth cusp |
tooth 5V |
tooth 4V |
tooth 4MD |
tooth 3V |
tooth 3MD |
tooth 2V |
tooth 2MD |
tooth 2D |
tooth 1V |
tooth 1MD |
tooth 1D |
tongue |
T interneuron |
t-interneuron |
thyroid stimulating hormone secreting cell |
thyroid primordium |
thyroid hormone secreting cell |
thyroid follicle |
thymus primordium |
thymus |
thymic epithelium |
thrombocyte |
thromboblast |
thoracic duct |
third ventricle |
thermoreceptor cell |
thecal cell layer |
theca cell |
thalamus |
tether cell |
testosterone secreting cell |
testis |
tertiary gustatory nucleus |
terminal Schwann cell |
terminal nerve |
tendon cell |
tendon |
telencephalon diencephalon boundary |
telencephalon |
telencephalic white matter |
telencephalic ventricle |
telencephalic nucleus |
tela chorioidea third ventricle |
tela chorioidea telencephalic ventricle |
tela chorioidea tectal ventricle |
tela chorioidea fourth ventricle |
tela chorioidea |
tegmentum |
tegmental nucleus |
tectum synoticum |
tecto-bulbar tract |
tectal ventricle |
T cell |
taste receptor cell |
taste bud |
tangential nucleus |
tail bud |
taenia marginalis posterior |
taenia marginalis anterior |
synovial joint |
synovial fluid |
synovial cell |
synostosis |
synencephalon |
symplectic |
sympathetic neuron |
sympathetic nervous system |
sympathetic chain ganglion |
swim bladder bud |
swim bladder artery |
swim bladder |
sustentacular cell |
suspensorium |
surface structure |
supratemporal sensory canal |
supraorbital sensory canal |
supraorbital lateral line neuromast |
supraorbital lateral line |
supraorbital bone |
supraoptic tract |
supraoptic commissure |
supraoccipital-parietal joint |
supraoccipital |
supraneural 9 |
supraneural 8 |
supraneural 7 |
supraneural 6 |
supraneural 5 |
supraneural 3 |
supraneural 2 |
supraneural 10 |
supraneural |
supraintestinal vein |
supraintestinal lymphatic vessel |
supraintestinal artery |
supraethmoid |
supradorsal |
supracommissural nucleus of ventral telencephalon |
supracleithrum-vertebral ligament |
supracleithrum-intercalar ligament |
supracleithrum |
suprachiasmatic nucleus |
supracarinalis |
supportive cell |
superior reticular formation tegmentum |
superior reticular formation medial column |
superior raphe nucleus |
superior cervical ganglion |
superior caudal ventral flexor |
superior caudal dorsal flexor |
superficial pretectum |
superficial pelvic adductor |
superficial pelvic abductor |
superficial ophthalmic nerve foramen |
superficial layer of breeding tubercle |
superficial lateralis |
superficial grey and white zone |
superficial caudal fin musculature |
superficial blastomere |
superficial adductor |
superficial abductor |
sulcus ypsiloniformis |
subtemporal fossa |
substance P secreting cell |
subopercle |
subintestinal vein |
subcutaneous fat |
subcommissural organ |
structural cell |
stromal cell |
striated muscle cell |
stretch receptor cell |
stratum periventriculare |
stratum opticum |
stratum marginale |
stratum griseum centrale |
stratum fibrosum et griseum superficiale |
stratum album centrale |
stratified squamous epithelial cell |
stratified keratinized epithelial stem cell |
stratified epithelial stem cell |
stratified epithelial cell |
stratified cuboidal epithelial cell |
stomodeum |
steroid hormone secreting cell |
sternohyoid |
stellate interneuron |
stellate cell |
statoacoustic (VIII) nucleus |
statoacoustic (VIII) ganglion |
s-shaped body |
squamous epithelial cell |
spleen |
splanchnocranium |
spinous layer of breeding tubercle |
spinal neuromere |
spinal nerve root |
spinal nerve |
spinal cord neural tube |
spinal cord neural rod |
spinal cord neural plate |
spinal cord neural keel |
spinal cord interneuron |
spinal cord |
spinal artery |
spinal accessory motor neuron |
sphenotic-prootic fossa |
sphenotic |
sphenoid region |
sperm duct |
spermatogonium |
spermatocyte |
spermatid |
sperm |
specialized hemal arch and spine |
somite border |
somite 9 |
somite 8 |
somite 7 |
somite 6 |
somite 5 |
somite 4 |
somite 30 |
somite 3 |
somite 29 |
somite 28 |
somite 27 |
somite 26 |
somite 25 |
somite 24 |
somite 23 |
somite 22 |
somite 21 |
somite 20 |
somite 2 |
somite 19 |
somite 18 |
somite 17 |
somite 16 |
somite 15 |
somite 14 |
somite 13 |
somite 12 |
somite 11 |
somite 10 |
somite 1 |
somite |
somatotropin secreting cell |
somatostatin secreting cell |
somatomotor neuron |
somatic stem cell |
somatic cell |
solid lens vesicle |
solid compound organ |
snout |
smooth muscle myoblast |
smooth muscle cell |
smooth muscle |
slow muscle myoblast |
slow muscle cell somite 9 |
slow muscle cell somite 8 |
slow muscle cell somite 7 |
slow muscle cell somite 6 |
slow muscle cell somite 5 |
slow muscle cell somite 4 |
slow muscle cell somite 30 |
slow muscle cell somite 3 |
slow muscle cell somite 29 |
slow muscle cell somite 28 |
slow muscle cell somite 27 |
slow muscle cell somite 26 |
slow muscle cell somite 25 |
slow muscle cell somite 24 |
slow muscle cell somite 23 |
slow muscle cell somite 22 |
slow muscle cell somite 21 |
slow muscle cell somite 20 |
slow muscle cell somite 2 |
slow muscle cell somite 19 |
slow muscle cell somite 18 |
slow muscle cell somite 17 |
slow muscle cell somite 16 |
slow muscle cell somite 15 |
slow muscle cell somite 14 |
slow muscle cell somite 13 |
slow muscle cell somite 12 |
slow muscle cell somite 11 |
slow muscle cell somite 10 |
slow muscle cell somite 1 |
slow muscle cell |
skin flap |
skeletal tissue |
skeletal system |
skeletal muscle satellite cell |
skeletal muscle myoblast |
skeletal muscle cell |
skeletal muscle |
skeletal element |
sinus venosus |
sinusoidal blood vessel endothelium |
sinus impar |
sinoatrial valve |
sinoatrial ring |
sinoatrial region |
sinoatrial node |
single fate stem cell |
single ciliated epithelial cell |
simple squamous epithelium |
simple organ |
simple cuboidal epithelium |
simple columnar epithelium |
simple columnar epithelial cell |
silver iridophore |
Sertoli cell |
serous membrane |
serotonin secreting cell |
serotonergic neuron |
sensory trigeminal nucleus |
sensory system |
sensory root of facial nerve |
sensory processing neuron |
sensory neuron |
sensory epithelial cell |
sensory canal tubule |
sensory canal tubular ossicle |
sensory canal |
seminal fluid secreting cell |
semicircular canal |
segmental plate |
segmental intercostal artery |
second tier layer of breeding tubercle |
secondary posterior lateral line primordium |
secondary neuron |
secondary motor neuron |
secondary islet |
secondary gustatory tract |
secondary gustatory nucleus trigeminal nucleus |
secondary gustatory nucleus medulla oblongata |
sclerotome somite 9 |
sclerotome somite 8 |
sclerotome somite 7 |
sclerotome somite 6 |
sclerotome somite 5 |
sclerotome somite 4 |
sclerotome somite 30 |
sclerotome somite 3 |
sclerotome somite 29 |
sclerotome somite 28 |
sclerotome somite 27 |
sclerotome somite 26 |
sclerotome somite 25 |
sclerotome somite 24 |
sclerotome somite 23 |
sclerotome somite 22 |
sclerotome somite 21 |
sclerotome somite 20 |
sclerotome somite 2 |
sclerotome somite 19 |
sclerotome somite 18 |
sclerotome somite 17 |
sclerotome somite 16 |
sclerotome somite 15 |
sclerotome somite 14 |
sclerotome somite 13 |
sclerotome somite 12 |
sclerotome somite 11 |
sclerotome somite 10 |
sclerotome somite 1 |
sclerotome |
sclerotic cartilage |
sclerotic bone |
scleral cell |
sclera |
Schlemm's canal |
scapulo-vertebral ligament |
scapulocoracoid |
scapular foramen |
scapula |
scaphium |
scale primordium |
scale |
sagitta |
saccus dorsalis |
sacculoagenar foramen |
saccule |
rudimentary neural arch |
RoV3 |
rostrolateral thalamic nucleus of Butler & Saidel |
rostral tuberal nucleus |
rostral thalamic nucleus |
rostral tegmental nucleus |
rostral root of abducens nerve |
rostral preglomerular nucleus |
rostral parvocellular preoptic nucleus |
rostral pars anterior |
rostral octaval nucleus |
rostral octaval nerve motor nucleus |
rostral motor nucleus |
rostral mesencephalo-cerebellar tract |
rostral cerebellar tract |
rostral blood island |
RoP motor neuron |
roof plate spinal cord region |
roof plate rhombomere region |
roof plate rhombomere 8 |
roof plate rhombomere 7 |
roof plate rhombomere 6 |
roof plate rhombomere 5 |
roof plate rhombomere 4 |
roof plate rhombomere 3 |
roof plate rhombomere 2 |
roof plate rhombomere 1 |
roof plate neural tube region |
roof plate midbrain region |
roof plate diencephalic region |
roof plate |
roofing cartilage |
RoM3m |
RoM3l |
RoM2m |
RoM2l |
RoM1r |
RoM1c |
RoL3 |
RoL2r |
RoL2c |
RoL2 |
RoL1 |
RoI2R |
RoI2C |
Rohon-Beard neuron |
rod bipolar cell |
right liver lobe |
right intestinal lymphatics |
rib of vertebra 6 |
rib of vertebra 5 |
rib of vertebra 4 |
rib of vertebra 3 |
rib of vertebra 2 |
rib of vertebra 1 |
rib |
rhombomere 8 |
rhombomere 7 |
rhombomere 6 |
rhombomere 5 |
rhombomere 4 |
rhombomere 3 |
rhombomere 2 |
rhombomere 1 |
rhombomere |
rhombic lip |
rhombencephalic octavola-teral efferent neuron |
rhombencephalic efferent neurons to the lateral line |
retroarticular |
retinal rod cell |
retinal pigmented epithelium |
retinal photoreceptor layer |
retinal outer plexiform layer |
retinal outer nuclear layer |
retinal neural layer |
retinal inner plexiform layer |
retinal inner nuclear layer |
retinal ganglion cell layer |
retinal ganglion cell |
retinal cone cell |
retinal bipolar neuron |
retina |
reticulocyte |
reticular formation |
reticular cell |
respiratory system |
reproductive system |
replacement element |
replacement bone |
renal vesicle |
renal tubule |
renal system |
renal principal cell |
renal portal vein |
renal intercalated cell |
renal glomerulus |
renal glomerular capsule epithelium |
renal glomerular capsule |
renal duct |
renal corpuscle |
renal capsular space |
renal artery |
renal alpha-intercalated cell |
regeneration fibroblast |
regeneration epithelium |
regenerating tissue |
regenerating fin |
red sensitive photoreceptor cell |
recurrent branch afferent branchial artery |
recessus lateralis |
receptor cell (sensu Animalia) |
ray vein |
raphe nucleus |
radial glial cell |
radial |
quadrate ventral process |
quadrate-metapterygoid joint |
quadrate-hyomandibula joint |
quadrate-entopterygoid joint |
quadrate-anguloarticular joint |
quadrate |
pyramidal cell |
Purkinje cell layer valvula cerebelli |
Purkinje cell layer corpus cerebelli |
Purkinje cell |
pupil |
pterotic fossa |
pterotic |
pterosphenoid-orbitosphenoid joint |
pterosphenoid |
pseudounipolar neuron |
pseudobranchial artery |
proximal straight tubule |
proximal pars anterior |
proximal convoluted tubule |
protractor hyoidei |
protoneuromast |
pro-T cell |
prosencephalic artery |
propterygium |
prootic-pterosphenoid joint |
prootic foramen |
prootic-exoccipital joint |
prootic depression |
prootic bulla |
prootic |
pro-NK cell |
proneural cluster |
pronephros |
pronephric tubule |
pronephric proximal straight tubule |
pronephric proximal convoluted tubule |
pronephric podocyte |
pronephric mesoderm |
pronephric glomerulus |
pronephric glomerular capsule epithelium |
pronephric glomerular capsule |
pronephric glomerular capillary |
pronephric glomerular basement membrane |
pronephric duct opening |
pronephric duct |
pronephric distal late tubule |
pronephric distal early tubule |
pronephric capsular space |
promonocyte |
proliferative region |
prolactin secreting cell |
progesterone secreting cell |
professional antigen presenting cell |
proepicardial cluster |
proctodeum |
pro-B cell |
primordial vasculature |
primordial midbrain channel |
primordial ligament |
primordial hindbrain channel |
primordial germ cell |
primitive prosencephalic artery |
primitive pectoral fin adductor |
primitive pectoral fin abductor |
primitive olfactory epithelium |
primitive mesencephalic artery |
primitive meninx |
primitive internal carotid artery |
primitive heart tube |
primary posterior lateral line primordium |
primary olfactory fiber layer |
primary neuron hindbrain |
primary neuron |
primary motor neuron |
primary islet |
primary interneuron |
primary head sinus |
primary germ layer |
primary dental epithelium |
prevomer |
preural vertebra |
preural centrum 1+ ural centrum 1 |
preural 2 vertebra |
preural 1 vertebra |
pretectum |
pretecto-mammillary tract |
pretectal periventricular nucleus |
presumptive ventral mesoderm |
presumptive ventral fin fold |
presumptive telencephalon |
presumptive swim bladder |
presumptive structure |
presumptive spinal cord |
presumptive sinus venosus |
presumptive shield |
presumptive segmental plate |
presumptive rhombomere 8 |
presumptive rhombomere 7 |
presumptive rhombomere 6 |
presumptive rhombomere 5 |
presumptive rhombomere 4 |
presumptive rhombomere 3 |
presumptive rhombomere 2 |
presumptive rhombomere 1 |
presumptive retinal pigmented epithelium |
presumptive pronephric mesoderm |
presumptive paraxial mesoderm |
presumptive neural retina |
presumptive neural plate |
presumptive midbrain |
presumptive mesoderm |
presumptive median fin fold |
presumptive intervening zone |
presumptive hypochord |
presumptive hindbrain |
presumptive forebrain |
presumptive floor plate |
presumptive enteric nervous system |
presumptive endoderm |
presumptive endocardium |
presumptive ectoderm |
presumptive dorsal mesoderm |
presumptive dorsal fin fold |
presumptive diencephalon |
presumptive cephalic mesoderm |
presumptive cardiac ventricle primitive heart tube |
presumptive cardiac ventricle heart tube |
presumptive bulbus arteriosus |
presumptive brain |
presumptive blood |
presumptive atrium primitive heart tube |
presumptive atrium heart tube |
presumptive atrioventricular canal |
pressoreceptor cell |
preplacodal ectoderm |
preopticohypothalamic tract |
preopticohypophyseal tract |
preoptic area |
preoperculo-mandibular sensory canal |
preopercular sensory canal |
preopercle vertical limb-hyomandibula joint |
preopercle vertical limb |
preopercle-retroarticular ligament |
preopercle horizontal limb-symplectic joint |
preopercle horizontal limb |
preopercle |
premaxillo-rostroid ligament |
premaxillary-maxillary ligament |
premaxilla ascending process |
premaxilla |
preglomerular nucleus |
preethmoid bone |
predentine |
precursor B cell |
prechordal plate |
precaudal vertebra |
post-Weberian supraneural |
post-vent vasculature |
post-vent region |
posttemporal fossa |
posttemporal |
postovulatory follicle |
post-otic sensory canal |
postoptic commissure |
posteromedial glomerulus |
posterior semicircular canal |
posterior segment eye |
posterior sclerotic bone |
posterior recess |
posterior pronephric duct |
posterior presumptive neural plate |
posterior pancreatic bud |
posterior neural tube |
posterior neural rod |
posterior neural plate |
posterior neural keel |
posterior naris |
posterior mesenteric artery |
posterior mesencephalic central artery |
posterior macula |
posterior lateral plate mesoderm |
posterior lateral mesoderm |
posterior lateral line system |
posterior lateral line primordium |
posterior lateral line placode |
posterior lateral line neuromast |
posterior lateral line nerve |
posterior lateral line ganglion |
posterior lateral line |
posterior kidney |
posterior intestine epithelium |
posterior intestine |
posterior crista primordium |
posterior crista |
posterior communicating artery |
posterior chamber swim bladder |
posterior cerebral vein |
posterior caudal vein |
posterior cardinal vein |
postcranial axial skeleton |
postcranial axial cartilage |
postcommissural nucleus of ventral telencephalon |
postcleithrum |
portion of tissue |
portion of organism substance |
portion of connective tissue |
pore |
polymodal neuron |
polychromatophilic erythroblast |
polster |
podocyte |
pneumatic duct |
pleuroperitoneal cavity |
plasma cell |
pioneer neuron |
pinealocyte |
pineal complex |
pillar of the semicircular canal |
pillar of the posterior semicircular canal |
pillar of the lateral semicircular canal |
pillar of the anterior semicircular canal |
pigment erythroblast |
pigmented epithelial cell |
pigment cell (sensu Vertebrata) |
pigment cell |
photoreceptor outer segment layer |
photoreceptor inner segment layer |
photoreceptor cell |
photopic photoreceptor cell |
pharynx |
pharyngohyoid |
pharyngobranchial cartilage |
pharyngobranchial bone |
pharyngobranchial 4 cartilage |
pharyngobranchial 3 cartilage |
pharyngobranchial 3 bone |
pharyngobranchial 2 cartilage |
pharyngobranchial 2 bone |
pharyngeal vasculature |
pharyngeal pouches 2-6 |
pharyngeal pouch 6 |
pharyngeal pouch 5 |
pharyngeal pouch 4 |
pharyngeal pouch 3 |
pharyngeal pouch 2 |
pharyngeal pouch 1 |
pharyngeal pouch |
pharyngeal musculature |
pharyngeal mesoderm |
pharyngeal epithelium |
pharyngeal endoderm |
pharyngeal ectoderm |
pharyngeal arch cartilage |
pharyngeal arch 7 skeleton |
pharyngeal arch 7 |
pharyngeal arch 6 skeleton |
pharyngeal arch 6 |
pharyngeal arch 5 skeleton |
pharyngeal arch 5 |
pharyngeal arch 4 skeleton |
pharyngeal arch 4 |
pharyngeal arch 3 skeleton |
pharyngeal arch 3-7 skeleton |
pharyngeal arch 3-7 |
pharyngeal arch 3 |
pharyngeal arch 2 skeleton |
pharyngeal arch 2 |
pharyngeal arch 1 |
pharyngeal arch |
phagocyte |
periventricular nucleus of ventral telencephalon |
periventricular nucleus of caudal tuberculum |
periventricular nucleus |
periventricular grey zone |
peritoneum |
peritoneal macrophage |
peripheral olfactory organ |
peripheral nucleus of ventral telencephalon |
peripheral neuron |
peripheral nervous system |
peripheral cardiac conduction system |
periorbital fat |
periocular mesenchyme |
perineuronal satellite cell |
perilymphatic space |
perilymphatic duct |
perilymph |
perijunctional fibroblast |
peridermal cell |
periderm |
pericyte |
perichordal connective tissue |
perichordal bone |
perichondrium |
perichondral bone |
pericardium |
pericardial muscle |
pericardial fat |
pericardial cavity |
periarticular chondrocyte |
peptidergic neuron |
peptide hormone secreting cell |
pelvic radial cartilage |
pelvic radial 3 cartilage |
pelvic radial 3 |
pelvic radial 2 cartilage |
pelvic radial 2 |
pelvic radial 1 cartilage |
pelvic radial 1 |
pelvic radial |
pelvic girdle |
pelvic fin skeleton |
pelvic fin musculature |
pelvic fin lepidotrichium 4 |
pelvic fin lepidotrichium 3 |
pelvic fin lepidotrichium 2 |
pelvic fin lepidotrichium 1 |
pelvic fin lepidotrichium |
pelvic fin field |
pelvic fin cartilage |
pelvic fin bud |
pelvic fin actinotrichium |
pelvic fin |
pelvic adductor profundus |
pelvic abductor profundus |
pectoral vein |
pectoral lymphatic vessel |
pectoral girdle |
pectoral fin vasculature |
pectoral fin skeleton |
pectoral fin sensory nerve |
pectoral fin radial |
pectoral fin proximal radial |
pectoral fin plate fat |
pectoral fin nerve |
pectoral fin musculature |
pectoral fin motor nerve 4 |
pectoral fin motor nerve 3 |
pectoral fin motor nerve 2 |
pectoral fin motor nerve 1 |
pectoral fin motor nerve |
pectoral fin lymph vessel |
pectoral fin lepidotrichium 7 |
pectoral fin lepidotrichium 6 |
pectoral fin lepidotrichium 5 |
pectoral fin lepidotrichium 4 |
pectoral fin lepidotrichium 3 |
pectoral fin lepidotrichium 2 |
pectoral fin lepidotrichium 1 |
pectoral fin lepidotrichium |
pectoral fin fold |
pectoral fin field |
pectoral fin endoskeletal disc |
pectoral fin distal radial |
pectoral fin cartilage |
pectoral fin bud |
pectoral fin breeding tubercle |
pectoral fin blood vessel |
pectoral fin actinotrichium |
pectoral fin |
pectoral artery |
pectinate muscle |
parvocellular superficial pretectal nucleus |
parvocellular preoptic nucleus |
pars superior ear |
pars subcommissuralis of ventral telencephalon |
pars intermedia |
pars inferior ear |
pars anterior |
parietal peritoneum |
parietal bone |
parhypural |
paraxial mesoderm |
paraventricular organ |
parathyroid hormone secreting cell |
parasympathetic neuron |
parasympathetic nervous system |
parasphenoid-basioccipital joint |
parasphenoid |
parapophysis/rib |
parapophysis 2 |
parapophysis 1 |
parapophysis |
parapineal organ |
parallel fiber |
parafollicular cell |
paracrine cell |
paracommissural nucleus |
parachordal vessel |
parachordal cartilage |
pancreatic system |
pancreatic PP cell |
pancreatic lobule |
pancreatic intralobular duct |
pancreatic interlobular duct |
pancreatic fat |
pancreatic epsilon cell |
pancreatic ductal cell |
pancreatic duct |
pancreatic D cell |
pancreatic centroacinar cell |
pancreatic bud |
pancreatic B cell |
pancreatic acinar gland |
pancreatic acinar cell |
pancreatic A cell |
pancreas primordium |
pancreas |
palatoquadrate cartilage |
palatoquadrate arch |
palatocerebral vein |
palatocerebral artery |
palate |
paired fin skeleton |
paired fin cartilage |
paired fin |
pain receptor cell |
oxygen accumulating cell |
oviduct |
ovary |
ovarian follicle stage IV |
ovarian follicle stage III |
ovarian follicle stage II |
ovarian follicle stage I |
ovarian follicle |
outer limiting membrane |
outer dental epithelium |
otolith organ |
otolithic lymph vessel |
otolith |
otic vesicle ventral protrusion |
otic vesicle protrusion |
otic vesicle posterior protrusion |
otic vesicle lateral protrusion |
otic vesicle anterior protrusion |
otic vesicle |
otic squamous epithelium |
otic sensory epithelium |
otic sensory canal |
otic region |
otic placode |
otic lateral line neuromast |
otic lateral line |
otic epithelium |
otic duct |
osteoprogenitor cell |
osteocyte |
osteoclast |
osteoblast |
os suspensorium medial flange |
os suspensorium |
organizer inducing center |
organism subdivision |
orbitosphenoid-prootic joint |
orbitosphenoid-lateral ethmoid joint |
orbitosphenoid |
orbital region |
orbital foramen |
orbit |
oral region |
oral epithelium |
oral ectoderm |
oral cavity |
optic vesicle |
optic vein |
optic tract |
optic tectum |
optic stalk |
optic recess |
optic primordium |
optic nerve head |
optic furrow |
optic foramen |
optic fissure |
optic fiber layer |
optic cup |
optic choroid vascular plexus |
optic choroid |
optic chiasm |
optic artery |
opercular lateral line neuromast |
opercular lateral line |
opercular flap |
opercular cavity |
opercular artery |
opercle-interopercle joint |
opercle |
oocyte stage V |
oocyte stage IV |
oocyte stage III |
oocyte stage II |
oocyte stage I |
oocyte |
ON-bipolar cell |
oligodendrocyte |
olfactory system |
olfactory support cell |
olfactory rosette |
olfactory region |
olfactory receptor cell |
olfactory placode |
olfactory pit |
olfactory nerve foramen |
olfactory granule cell |
olfactory field |
olfactory epithelium |
olfactory epithelial support cell |
olfactory bulb protoglomerulus |
olfactory bulb glomerulus |
olfactory bulb |
OFF-bipolar cell |
odontoid tissue |
odontocyte |
odontoclast |
odontoblast |
oculomotor nucleus |
ocular blood vessel |
octaval nerve sensory nucleus |
octaval nerve motor nucleus |
occipital region |
occipital lateral line neuromast |
occipital lateral line |
occipital arch cartilage |
nucleus taeniae |
nucleus subglomerulosis |
nucleus ruber |
nucleus of the tract of the postoptic commissure |
nucleus of the tract of the anterior commissure |
nucleus of the posterior recess |
nucleus of the medial longitudinal fasciculus synencephalon |
nucleus of the medial longitudinal fasciculus medulla oblongata |
nucleus of the lateral recess |
nucleus of the descending root |
nucleus lateralis valvulae |
nucleus isthmi |
nucleus Edinger-Westphal |
nucleate erythrocyte |
notochord posterior region |
notochord outer sheath cell |
notochord inner cell |
notochordal ossification |
notochord |
norepinephrin secreting cell |
non-Weberian precaudal vertebra |
non neural ectoderm |
noninvoluting endocytic marginal cell cluster |
nitrergic neuron |
nevus |
neutrophil progenitor cell |
neutrophilic promyelocyte |
neutrophilic myelocyte |
neutrophilic myeloblast |
neutrophilic metamyelocyte |
neutrophil |
neurosecretory neuron |
neuroplacodal cell |
neuron neural crest derived |
neuronal stem cell |
neuron |
neuromere |
neuromast support cell |
neuromast mantle cell |
neuromast hair cell |
neuromast foramen |
neuromast |
neurohypophysis |
neuroglioform cell |
neurogenic placode |
neurogenic field |
neuroepithelial cell |
neuroendocrine cell |
neuroectoderm |
neurocranium |
neurocranial trabecula |
neuroblast (sensu Vertebrata) |
neuroblast |
neurecto-epithelial cell |
neurectodermal cell |
neuraxis flexure |
neural tube |
neural spine 4 |
neural spine |
neural rod |
neural prezygapophysis |
neural postzygapophysis |
neural plate |
neural keel |
neural crest telencephalon |
neural crest midbrain |
neural crest hindbrain |
neural crest diencephalon |
neural crest cell |
neural crest |
neural complex |
neural arch 4 |
neural arch 3 |
neural arch |
nervous system |
nerve |
nephron progenitor |
nephron |
nephrogenic mesenchyme stem cell |
NCC ionocyte |
natural killer cell |
nasal vein |
nasal ciliary artery |
nasal capsule |
nasal bone |
nasal artery |
naris |
NaK ionocyte |
naive B cell |
myotome somite 9 |
myotome somite 8 |
myotome somite 7 |
myotome somite 6 |
myotome somite 5 |
myotome somite 4 |
myotome somite 30 |
myotome somite 3 |
myotome somite 29 |
myotome somite 28 |
myotome somite 27 |
myotome somite 26 |
myotome somite 25 |
myotome somite 24 |
myotome somite 23 |
myotome somite 22 |
myotome somite 21 |
myotome somite 20 |
myotome somite 2 |
myotome somite 19 |
myotome somite 18 |
myotome somite 17 |
myotome somite 16 |
myotome somite 15 |
myotome somite 14 |
myotome somite 13 |
myotome somite 12 |
myotome somite 11 |
myotome somite 10 |
myotome somite 1 |
myotome |
myoseptum |
myoepithelial cell |
myocardium |
myocardial precursor |
myoblast |
myeloid lineage restricted progenitor cell |
myeloid leukocyte |
myeloid cell |
myeloblast |
myelinating Schwann cell |
myelin accumulating cell |
musculature system |
muscle stem cell |
muscle precursor cell |
muscle pioneer somite 9 |
muscle pioneer somite 8 |
muscle pioneer somite 7 |
muscle pioneer somite 6 |
muscle pioneer somite 5 |
muscle pioneer somite 4 |
muscle pioneer somite 30 |
muscle pioneer somite 3 |
muscle pioneer somite 29 |
muscle pioneer somite 28 |
muscle pioneer somite 27 |
muscle pioneer somite 26 |
muscle pioneer somite 25 |
muscle pioneer somite 24 |
muscle pioneer somite 23 |
muscle pioneer somite 22 |
muscle pioneer somite 21 |
muscle pioneer somite 20 |
muscle pioneer somite 2 |
muscle pioneer somite 19 |
muscle pioneer somite 18 |
muscle pioneer somite 17 |
muscle pioneer somite 16 |
muscle pioneer somite 15 |
muscle pioneer somite 14 |
muscle pioneer somite 13 |
muscle pioneer somite 12 |
muscle pioneer somite 11 |
muscle pioneer somite 10 |
muscle pioneer somite 1 |
muscle pioneer |
muscle cell |
muscle |
multi-tissue structure |
multipolar neuron |
multilaminar epithelium |
multi fate stem cell |
multi-ciliated epithelial cell |
Muller cell |
mucus secreting cell |
mouth |
motor nucleus of vagal nerve |
motor neuron |
motile cell |
mossy fiber |
mononuclear phagocyte |
mononuclear osteoclast |
mononuclear odontoclast |
mononuclear cell |
monocyte |
monoblast |
molecular layer valvula cerebelli |
molecular layer corpus cerebelli |
MiV2 |
MiV1 |
MiR2 |
MiR1 |
MiP motor neuron |
MiM1 |
migratory slow muscle precursor cell |
midline column |
mid intestine epithelium |
mid intestine |
middle mesencephalic central artery |
middle lateral line system |
middle lateral line primordium |
middle lateral line placode |
middle lateral line neuromast |
middle lateral line nerve |
middle lateral line ganglion |
middle lateral line |
mid diencephalic organizer |
mid cerebral vein |
midbrain nucleus |
midbrain neural tube |
midbrain neural rod |
midbrain neural plate |
midbrain neural keel |
midbrain interneuron |
midbrain hindbrain boundary neural tube |
midbrain hindbrain boundary neural rod |
midbrain hindbrain boundary neural plate |
midbrain hindbrain boundary neural keel |
midbrain hindbrain boundary |
midbrain |
MiD3i |
MiD3cm |
MiD3cl |
MiD2i |
MiD2cm |
MiD2cl |
microvillous olfactory receptor neuron |
micropylar cell |
microglial cell |
microcirculatory vessel |
metencephalic artery |
metapterygoid-symplectic fenestra |
metapterygoid |
mesovarium |
mesothelial cell |
mesonephric podocyte |
mesonephric nephron |
mesonephric duct |
meso-epithelial cell |
mesoderm pelvic fin bud |
mesoderm pectoral fin bud |
mesodermal cell |
mesoderm |
mesocoracoid cartilage |
mesocoracoid bone |
mesethmoid-vomer joint |
mesethmoid-lateral ethmoid joint |
mesethmoid bone |
mesentery |
mesenchyme pelvic fin |
mesenchyme pectoral fin |
mesenchyme median fin fold |
mesenchyme dorsal fin |
mesenchyme derived from trunk neural crest |
mesenchyme derived from head neural crest |
mesenchyme derived from head mesoderm |
mesenchyme condensation cell |
mesenchyme |
mesenchymal lymphangioblast |
mesenchymal cell |
mesencephalic vein |
mesencephalic nucleus of trigeminal nerve |
mesencephalic artery |
mesangial cell |
Merkel cell |
mental barbel |
memory T cell |
memory B cell |
membrane bone |
MeM1 |
MeM |
MeLr |
MeLm |
MeLc |
melanophore stripe |
melanocyte stimulating hormone secreting cell |
melanocyte |
melanoblast |
MeL |
megakaryocyte erythroid progenitor cell |
medulla oblongata |
mediodorsal zone of the olfactory bulb |
mediodorsal tooth row |
median tuberal portion |
median palatocerebral vein |
median fin fold |
median fin cartilage |
median fin |
median axial vein |
medial zone olfactory bulb |
medial zone of dorsal telencephalon |
medial valvula cerebelli |
medial rectus |
medial protoglomerulus 4 |
medial protoglomerulus 3 |
medial protoglomerulus 2 |
medial protoglomerulus 1 |
medial protoglomerulus |
medial preglomerular nucleus |
medial olfactory tract |
medial octavolateralis nucleus |
medial motor nucleus of vagal nerve |
medial migration pathway mesenchyme |
medial longitudinal fasciculus |
medial longitudinal catecholaminergic tract |
medial funicular nucleus trigeminal nucleus |
medial funicular nucleus medulla oblongata |
medial forebrain bundle telencephalon |
medial forebrain bundle diencephalon |
medial forebrain bundle |
medial floor plate |
medial facial lymph vessel |
medial column |
medial caudal lobe |
Meckel's cartilage |
mechanoreceptor cell |
mdG6 |
mdG5 |
mdG4 |
mdG3 |
mdG2 |
mdG1 |
MCoD |
M cell |
maxillo-rostroid ligament |
maxillo-mandibular ligament |
maxillary barbel vasculature |
maxillary barbel proximal plexus |
maxillary barbel lymph vessel |
maxillary barbel blood vessel |
maxillary barbel blood sinus |
maxillary barbel |
maxilla |
Mauthner neuron |
mature neutrophil |
mature natural killer cell |
mature gamma-delta T cell |
mature B cell |
marginal blastomere |
margin |
manubrium |
mandibular symphysis |
mandibular sensory canal |
mandibular neural crest |
mandibular muscle |
mandibular lateral line neuromast |
mandibular lateral line |
mandibular fat |
mandibular arch skeleton |
male organism |
main intrapancreatic duct |
maGx |
magnocellular superficial pretectal nucleus |
magnocellular preoptic nucleus |
magnocellular octaval nucleus |
maG1 |
macula utricle |
macula saccule |
macula neglecta |
macula lagena |
macula communis |
macula |
macrophage |
macroglial cell |
lymph vessel endothelium |
lymph vessel |
lymph vasculature |
lymphoid progenitor cell |
lymphocyte |
lymphatic system |
lymphatic capillary |
lymphatic branchial arch 4 |
lymphatic branchial arch 3 |
lymphatic branchial arch 2 |
lymphatic branchial arch 1 |
lymphangiogenic sprout |
lymphangioblast cord |
lymphangioblast |
lymph |
luteinizing hormone secreting cell |
lower right intestinal lymph vessel |
lower rhombic lip |
lower oral valve |
lower lip |
lower left intestinal lymph vessel |
longitudinal lateral lymphatic vessel |
longitudinal hypochordal |
locus coeruleus |
liver and biliary system |
liver |
lip epithelium |
lip |
lining cell |
ligament cell |
ligament |
lGx |
lG6 |
lG5 |
lG4 |
lG3 |
lG2 |
lG1 |
Leydig cell |
levator operculi |
levator arcus palatini |
leukocyte |
leucophore |
leucoblast |
leptomeningeal cell |
lepidotrichium segment |
lepidotrichium joint |
lepidotrichium |
lens placode |
lens epithelium |
lens capsule |
lens |
left liver lobe |
left intestinal lymphatics |
lateral zone olfactory bulb |
lateral zone of dorsal telencephalon |
lateral wall telencephalic region |
lateral wall spinal cord |
lateral wall rhombomere 8 |
lateral wall rhombomere 7 |
lateral wall rhombomere 6 |
lateral wall rhombomere 5 |
lateral wall rhombomere 4 |
lateral wall rhombomere 3 |
lateral wall rhombomere 2 |
lateral wall rhombomere 1 |
lateral wall neural tube |
lateral wall neural rod |
lateral wall midbrain region |
lateral wall diencephalic region |
lateral valvula cerebelli |
lateral spinal nerve |
lateral semicircular canal |
lateral reticular nucleus |
lateral rectus |
lateral recess |
lateral protoglomerulus 4 |
lateral protoglomerulus 3 |
lateral protoglomerulus 2 |
lateral protoglomerulus 1 |
lateral protoglomerulus |
lateral preglomerular nucleus |
lateral plate mesoderm |
lateral olfactory tract |
lateral nucleus of ventral telencephalon |
lateral migration pathway mesenchyme |
lateral mesoderm |
lateral mesenchyme derived from mesoderm |
lateral longitudinal fasciculus |
lateral line system |
lateral line sensory nucleus |
lateral line scale |
lateral line primordium |
lateral line nerve |
lateral line ganglion |
lateral line |
lateral lemniscus nucleus |
lateral larval melanophore stripe |
lateral hypothalamic nucleus |
lateral funiculus |
lateral forebrain bundle telencephalon |
lateral forebrain bundle diencephalon |
lateral forebrain bundle |
lateral fontanel of frontal |
lateral floor plate |
lateral facial lymph vessel |
lateral ethmoid-supraethmoid |
lateral ethmoid-frontal joint |
lateral ethmoid-ectopterygoid ligament |
lateral ethmoid-autopalatine ligament |
lateral ethmoid |
lateral dorsal aorta |
lateral crista primordium |
lateral crista |
lateral column |
larval melanophore stripe |
lapillus |
lamina rara interna |
lamina rara externa |
lamina orbitonasalis |
lamina densa |
lagenar capsule |
lagena |
lacunocanalicular system |
lacunocanalicular canal |
lacuna |
labial cavity |
Kupffer's vesicle |
Kolmer-Agduhr neuron |
kinethmoid cartilage |
kinethmoid bone |
kidney vasculature |
kidney medulla cell |
kidney interstitial cell |
kidney epithelial cell |
kidney cell |
kidney blood vessel |
kidney |
keratinocyte |
keratin accumulating cell |
kappe olfactory receptor neuron |
juxtaglomerular cell |
jugular lymphatic vessel |
joint |
jaw row breeding tubercle |
jaw flap breeding tubercle |
jaw flap |
I-YSL |
ito cell |
isthmic primary nucleus |
islet |
iris stroma |
iris blood vessels |
iris |
iridophore |
iridoblast |
ionocyte |
intrapancreatic duct |
intramembranous bone |
intrahepatic bile duct epithelial cell |
intrahepatic bile duct |
intestine lumen |
intestine |
intestinal villus |
intestinal rod |
intestinal opening |
intestinal mucosal muscle |
intestinal mucosa |
intestinal lymphatic network |
intestinal lamina propria mucosa |
intestinal interlymphatic vessel |
intestinal epithelium |
intestinal epithelial cell |
intestinal bulb primordium |
intestinal bulb epithelium |
intestinal bulb |
intervillus pockets |
intervessel commissure |
inter-ventral hypohyal joint |
intervening zone |
intertectal commissure |
intersegmental vessel |
intersegmental vein |
intersegmental lymph vessel |
intersegmental artery |
interrenal vessel |
interrenal primordium |
interrenal gland |
interrenal angiogenic sprout |
interray vessel |
interradialis caudalis |
inter-premaxillary joint |
interpeduncular nucleus tegmentum |
interpeduncular nucleus medulla oblongata |
inter-parietal joint |
interossicular ligament |
interopercular-mandibular ligament |
interopercle |
interneuron |
interneuromast cell |
internal pharyngoclavicularis |
internal levator |
internal gill bud |
internal cellular layer |
internal carotid artery |
intermuscular bone |
intermediate thalamic nucleus |
intermediate reticular formation |
intermediate nucleus |
intermediate mesoderm |
intermediate mesenchyme |
intermediate hypothalamus |
intermediate cell mass of mesoderm |
intermandibularis |
inter-hypobranchial 3 joint |
interhyoideus |
interhyal-epihyal joint |
interhyal cartilage |
inter-frontal joint |
intercostal ligament |
inter-coracoid joint |
intercalated duct pancreas |
intercalarium ascending process |
intercalarium articulating process |
intercalarium |
intercalar |
inter-basipterygium joint |
integument ionocyte |
integument |
insulin secreting cell |
insulating cell |
inner optic circle |
inner mental barbel |
inner limiting membrane |
inner ear foramen |
inner ear |
inner dental epithelium |
inhibitory interneuron |
infundibulum |
infraorbital series |
infraorbital sensory canal |
infraorbital lateral line neuromast |
infraorbital lateral line |
infraorbital 5 |
infraorbital 4 |
infraorbital 3 |
infraorbital 2 |
infraorbital 1 |
infraorbital |
infracarinalis |
inferior reticular formation |
inferior raphe nucleus |
inferior olive |
inferior lobe |
inferior hyohyoid |
inferior caudal ventral flexor |
inferior caudal dorsal flexor |
inclinator muscle |
immune system |
immature thymic epithelium |
immature Schwann cell |
immature posterior macula |
immature neutrophil |
immature natural killer cell |
immature macula |
immature hair cell posterior macula |
immature hair cell anterior macula |
immature gonad |
immature gamma-delta T cell |
immature eye |
immature B cell |
immature anterior macula |
hypurapophysis |
hypural muscle |
hypural 5 |
hypural 4 |
hypural 3 |
hypural 2 |
hypural 1 |
hypural |
hypothalamus |
hypophysis |
hypophyseal vein |
hypophyseal fenestra |
hypophyseal capillary |
hypophyseal artery |
hypohyal bone |
hypodermis |
hypodermal cell |
hypocretin-secreting neuron |
hypochord |
hypobranchial cartilage |
hypobranchial bone |
hypobranchial artery |
hypobranchial 4 cartilage |
hypobranchial 4 bone |
hypobranchial 3 cartilage |
hypobranchial 3 bone |
hypobranchial 2 cartilage |
hypobranchial 2 bone |
hypobranchial 1 cartilage |
hypobranchial 1 bone |
hypoblast |
hypertrophic chondrocyte |
hypaxial region somite 9 |
hypaxial region somite 8 |
hypaxial region somite 7 |
hypaxial region somite 6 |
hypaxial region somite 5 |
hypaxial region somite 4 |
hypaxial region somite 30 |
hypaxial region somite 3 |
hypaxial region somite 29 |
hypaxial region somite 28 |
hypaxial region somite 27 |
hypaxial region somite 26 |
hypaxial region somite 25 |
hypaxial region somite 24 |
hypaxial region somite 23 |
hypaxial region somite 22 |
hypaxial region somite 21 |
hypaxial region somite 20 |
hypaxial region somite 2 |
hypaxial region somite 19 |
hypaxial region somite 18 |
hypaxial region somite 17 |
hypaxial region somite 16 |
hypaxial region somite 15 |
hypaxial region somite 14 |
hypaxial region somite 13 |
hypaxial region somite 12 |
hypaxial region somite 11 |
hypaxial region somite 10 |
hypaxial region somite 1 |
hypaxial myotome region |
hypaxialis |
hyosymplectic cartilage |
hyomandibular-otic region joint |
hyomandibular foramen |
hyomandibula-pterotic joint |
hyomandibula-opercle joint |
hyomandibula-metapterygoid joint |
hyomandibula |
hyoid neural crest |
hyoid muscle |
hyoideomandibular nerve |
hyohyoideus |
hyaloid vessel |
hyaloid vein |
hyaloid artery |
horizontal myoseptum |
horizontal commissure |
horizontal cell |
hindbrain nucleus |
hindbrain neural tube |
hindbrain neural rod |
hindbrain neural plate |
hindbrain neural keel |
hindbrain interneuron |
hindbrain commissure |
hindbrain |
hepatopancreatic ampulla |
hepatocyte |
hepatoblast |
hepatic vein |
hepatic sinusoid |
hepatic portal vein |
hepatic duct |
hepatic artery |
hematopoietic system |
hematopoietic stem cell |
hematopoietic multipotent progenitor cell |
hematopoietic cell |
hemal spine |
hemal prezygapophysis |
hemal postzygapophysis |
hemal arch |
heart vasculature |
heart valve |
heart tube |
heart rudiment |
heart primordium |
heart |
head sensory canal system |
head muscle |
head mesenchyme |
head kidney |
head |
hatching gland cell |
hatching gland |
hair cell posterior macula |
hair cell anterior macula |
hair cell |
habenular commissure |
habenula |
gut epithelium |
gut endothelial cell |
gut absorptive cell |
gut |
gustatory system |
groove |
griseum centrale |
grey matter |
green sensitive photoreceptor cell |
granulosa cell layer |
granulosa cell |
granulocyte monocyte progenitor cell |
granulocyte |
granule cell |
granular layer valvula cerebelli |
granular layer corpus cerebelli |
granular eminence |
gonad primordium |
gonad |
Golgi cell |
gold iridophore |
goblet cell |
glycinergic neuron |
glutamatergic neuron |
glucocorticoid secreting cell |
glucagon secreting cell |
glossopharyngeal placode |
glossopharyngeal neural crest |
glossopharyngeal lobe |
glossopharyngeal ganglion |
glomerular layer |
glomerular capillary |
glomerular basement membrane |
glioblast (sensu Vertebrata) |
glioblast |
glial cell (sensu Vertebrata) |
glial cell |
gill ray |
gill raker |
gill opening |
gill lamella |
gill ionocyte |
gill filament |
gill |
gigantocellular part of magnocellular preoptic nucleus |
ghrelin secreting cell |
germ ring |
germ line cell |
gastrula cell |
ganglion |
gamma-delta T cell |
gamma-delta intraepithelial T cell |
gamete |
gall bladder |
GAG secreting cell |
GABAergic neuron |
frontal-pterotic joint |
frontal-parietal joint |
frontal bone |
fourth ventricle |
fossa |
forerunner cell group |
forebrain ventricle |
forebrain neural tube |
forebrain neural rod |
forebrain neural plate |
forebrain neural keel |
forebrain midbrain boundary neural tube |
forebrain midbrain boundary neural rod |
forebrain midbrain boundary neural plate |
forebrain midbrain boundary neural keel |
forebrain midbrain boundary |
forebrain |
foramen magnum |
foramen |
fontanel |
folliculostellate cell |
follicle stimulating hormone secreting cell |
floor plate telencephalic region |
floor plate spinal cord region |
floor plate rhombomere region |
floor plate rhombomere 8 |
floor plate rhombomere 7 |
floor plate rhombomere 6 |
floor plate rhombomere 5 |
floor plate rhombomere 4 |
floor plate rhombomere 3 |
floor plate rhombomere 2 |
floor plate rhombomere 1 |
floor plate neural tube |
floor plate neural rod |
floor plate midbrain region |
floor plate diencephalic region |
floor plate |
flexural organ |
flexor muscle |
fin vasculature |
fin musculature |
fin lymph vessel |
fin fold pectoral fin bud |
fin fold actinotrichium |
fin bud |
fin blood vessel |
fin |
filamental artery |
fibrous joint |
fibroblast |
fertilized egg |
fenestrated cell |
fenestrated blood vessel endothelium |
female organism |
fat cell |
fast muscle myoblast |
fast muscle cell somite 9 |
fast muscle cell somite 8 |
fast muscle cell somite 7 |
fast muscle cell somite 6 |
fast muscle cell somite 5 |
fast muscle cell somite 4 |
fast muscle cell somite 30 |
fast muscle cell somite 3 |
fast muscle cell somite 29 |
fast muscle cell somite 28 |
fast muscle cell somite 27 |
fast muscle cell somite 26 |
fast muscle cell somite 25 |
fast muscle cell somite 24 |
fast muscle cell somite 23 |
fast muscle cell somite 22 |
fast muscle cell somite 21 |
fast muscle cell somite 20 |
fast muscle cell somite 2 |
fast muscle cell somite 19 |
fast muscle cell somite 18 |
fast muscle cell somite 17 |
fast muscle cell somite 16 |
fast muscle cell somite 15 |
fast muscle cell somite 14 |
fast muscle cell somite 13 |
fast muscle cell somite 12 |
fast muscle cell somite 11 |
fast muscle cell somite 10 |
fast muscle cell somite 1 |
fast muscle cell |
fasciculus retroflexus |
facio-acoustic neural crest |
facial placode |
facial neural crest |
facial nerve motor nucleus |
facial lymphatic vessel |
facial lymphatic sprout |
facial lymphatic network |
facial lobe |
facial ganglion |
E-YSL |
eye photoreceptor cell |
eye |
extrascapula |
extrapancreatic duct |
extraocular musculature |
extramedullary cell |
extrahepatic duct |
extraembryonic structure |
extraembryonic cell |
extracellular matrix secreting cell |
extracellular lipid lamellae |
external pharyngoclavicularis |
external levatores |
external lateral ventral muscle |
external lateral dorsal muscle |
external cellular layer |
extension |
exocrine pancreas |
exocrine cell |
exoccipital posteroventral region |
exoccipital |
EVL |
eurydendroid cell |
ethmoid cartilage |
estradiol secreting cell |
esophagus |
esophageal striated muscle |
esophageal sphincter |
esophageal fat |
esophageal epithelium |
erythrophore |
erythroid progenitor cell |
erythroid lineage cell |
erythroblast |
erector muscle |
epural |
epithelium |
epithelial mesenchymal boundary |
epithelial cell of pancreas |
epithelial cell of esophagus |
epithelial cell |
epithalamus |
epipleural |
epiphysis |
epiphyseal stalk |
epiphyseal cluster |
epiphyseal bar |
epiotic |
epineural |
epinephrin secreting cell |
epihyal-ceratohyal joint |
epihyal-branchiostegal ray joint |
epihyal |
epidermis |
epidermal superficial stratum |
epidermal placode |
epidermal intermediate stratum |
epidermal cell |
epidermal basal stratum |
epicardium |
epibranchial uncinate process |
epibranchial placode |
epibranchial ganglion |
epibranchial field |
epibranchial cartilage |
epibranchial bone |
epibranchial 5 |
epibranchial 4 cartilage |
epibranchial 4 bone |
epibranchial 3 cartilage |
epibranchial 3 bone |
epibranchial 2 cartilage |
epibranchial 2 bone |
epibranchial 1 cartilage |
epibranchial 1 bone |
epiblast |
ependymoglial cell |
ependymal cell |
epaxial region somite 9 |
epaxial region somite 8 |
epaxial region somite 7 |
epaxial region somite 6 |
epaxial region somite 5 |
epaxial region somite 4 |
epaxial region somite 30 |
epaxial region somite 3 |
epaxial region somite 29 |
epaxial region somite 28 |
epaxial region somite 27 |
epaxial region somite 26 |
epaxial region somite 25 |
epaxial region somite 24 |
epaxial region somite 23 |
epaxial region somite 22 |
epaxial region somite 21 |
epaxial region somite 20 |
epaxial region somite 2 |
epaxial region somite 19 |
epaxial region somite 18 |
epaxial region somite 17 |
epaxial region somite 16 |
epaxial region somite 15 |
epaxial region somite 14 |
epaxial region somite 13 |
epaxial region somite 12 |
epaxial region somite 11 |
epaxial region somite 10 |
epaxial region somite 1 |
epaxial myotome region |
epaxialis |
entopterygoid-metapterygoid joint |
entopterygoid |
enteroendocrine cell |
enterocyte |
enteric neuron |
enteric nervous system |
enteric musculature |
enteric longitudinal muscle |
enteric circular muscle |
enkephalin secreting cell |
endothelial tip cell |
endothelial cell |
endorphin secreting cell |
endolymphatic duct |
endolymph |
endohypothalamic tract |
endo-epithelial cell |
endodermal cell |
endoderm |
endocrine system |
endocrine pancreas |
endocrine cell |
endochondral element |
endochondral bone |
endocardium |
endocardial ring |
endocardial precursor |
endocardial cushion |
enameloid |
eminentia thalami |
embryonic structure |
embryonic blood vessel endothelial progenitor cell |
electrically signaling cell |
electrically responsive cell |
electrically active cell |
efferent neuron |
efferent lamellar arteriole |
efferent glomerular arteriole |
efferent filamental artery |
efferent branchial artery |
ectopterygoid-quadrate joint |
ectopterygoid-entopterygoid joint |
ectopterygoid |
ectomesenchyme |
ecto-epithelial cell |
ectodermal cell |
ectoderm |
early embryonic cell |
ductus communicans |
duct epithelial cell |
duct |
dorsoventral diencephalic tract |
dorso-rostral cluster |
dorsomedial optic tract |
dorsolateral zone olfactory bulb |
dorsolateral septum |
dorsolateral placode |
dorsolateral motor nucleus of vagal nerve |
dorsolateral field |
dorsal zone olfactory bulb |
dorsal zone of dorsal telencephalon |
dorsal transverse |
dorsal tooth row |
dorsal thalamus |
dorsal telencephalon |
dorsal tegmental nucleus |
dorsal spinal nerve |
dorsal root ganglion |
dorsal root |
dorsal retractor |
dorsal rectus |
dorsal proneural cluster |
dorsal periventricular hypothalamus |
dorsal pelvic arrector |
dorsal oblique extraocular muscle |
dorsal oblique branchial muscle |
dorsal nucleus of ventral telencephalon |
dorsal motor root of V |
dorsal motor nucleus trigeminal nerve |
dorsal mesentery |
dorsal longitudinal vein |
dorsal longitudinal lymphatic vessel |
dorsal longitudinal fasciculus |
dorsal longitudinal anastomotic vessel |
dorsal lateral line neuromast |
dorsal lateral line |
dorsal larval melanophore stripe |
dorsal interfilamental caudal muscle |
dorsal inclinator |
dorsal hypothalamic zone |
dorsal hypohyal-ventral hypohyal joint |
dorsal hypohyal-urohyal joint |
dorsal hypohyal bone |
dorsal hyoid arch |
dorsal horn spinal cord |
dorsal habenular nucleus |
dorsal funiculus |
dorsal fin skeleton |
dorsal fin retractor |
dorsal fin radial |
dorsal fin pterygiophore 8 |
dorsal fin pterygiophore 7 |
dorsal fin pterygiophore 6 |
dorsal fin pterygiophore 5 |
dorsal fin pterygiophore 4 |
dorsal fin pterygiophore 3 |
dorsal fin pterygiophore 2 |
dorsal fin pterygiophore 1 |
dorsal fin pterygiophore |
dorsal fin proximal radial 8 |
dorsal fin proximal radial 7 |
dorsal fin proximal radial 6 |
dorsal fin proximal radial 5 |
dorsal fin proximal radial 4 |
dorsal fin proximal radial 3 |
dorsal fin proximal radial 2 |
dorsal fin proximal radial 1 |
dorsal fin proximal radial |
dorsal fin protractor |
dorsal fin musculature |
dorsal fin lepidotrichium 7 |
dorsal fin lepidotrichium 6 |
dorsal fin lepidotrichium 5 |
dorsal fin lepidotrichium 4 |
dorsal fin lepidotrichium 3 |
dorsal fin lepidotrichium 2 |
dorsal fin lepidotrichium 1 |
dorsal fin lepidotrichium |
dorsal fin fold |
dorsal fin distal radial 8 |
dorsal fin distal radial 7 |
dorsal fin distal radial 6 |
dorsal fin distal radial 5 |
dorsal fin distal radial 4 |
dorsal fin distal radial 3 |
dorsal fin distal radial 2 |
dorsal fin distal radial 1 |
dorsal fin distal radial |
dorsal fin |
dorsal erector |
dorsal entopeduncular nucleus of ventral telencephalon |
dorsal depressor |
dorsal ciliary vein |
dorsal caudal thalamic nucleus |
dorsal branch nasal ciliary artery |
dorsal axial hypoblast |
dorsal arrector |
dorsal aorta |
dorsal anterior lateral line nerve |
dorsal anterior lateral line ganglion |
dorsal actinotrichium |
dorsal accessory optic nucleus |
dopaminergic neuron |
DoLA |
dlG5 |
dlG4 |
dlG3 |
dlG2 |
dlG1 |
distal late tubule |
distal epidermal cap |
distal early tubule |
distal bulb of the maxillary blood sinus |
dilator operculi |
digestive system duct |
digestive system |
digestive enzyme secreting cell |
diffuse nucleus inferior lobe |
diencephalon |
diencephalic white matter |
diencephalic nucleus |
diencephalic efferent neurons to the lateral line |
dG1 |
developing mesonephric proximal tubule |
developing mesonephric nephron |
developing mesonephric distal tubule |
descending trigeminal root |
descending octaval nucleus |
Descemet's membrane |
dermomyotome |
dermis |
dermatocranium |
dermal superficial region |
dermal deep region |
dermal bone |
depressor muscle |
dentine |
dentary foramen |
dentary-anguloarticular joint |
dentary |
dental papilla cell |
dental papilla |
dental organ |
dental mesenchyme |
dental epithelium |
dendritic cell |
DEL |
deep white zone |
deep lateral ventral muscle |
deep lateral dorsal muscle |
deep caudal fin musculature |
deep blastomere |
decussation of the medial octavolateralis nucleus |
decussation of medial funicular nucleus |
D cell |
cystic duct |
cyanophore |
cyanoblast |
cupula |
crypt olfactory receptor neuron |
crypt neuron olfactory support cell |
crossed tecto-bulbar tract |
cranium |
cranial vault |
cranial vasculature |
cranial neural crest cell |
cranial neural crest |
cranial nerve X |
cranial nerve VIII |
cranial nerve VII |
cranial nerve VI |
cranial nerve V |
cranial nerve root |
cranial nerve IX |
cranial nerve IV |
cranial nerve III |
cranial nerve II |
cranial nerve I |
cranial nerve |
cranial motor neuron |
cranial lymph vessel |
cranial ganglion |
cranial fat |
cranial division of the internal carotid artery |
cranial cartilage |
cranial blood vessel |
CoSA |
corpus mamillare |
corpuscles of Stannius |
corpus cerebelli |
coronomeckelian |
coronary vein |
coronary capillary |
coronary artery |
corneo-scleral junction |
corneal stroma |
corneal primordium |
corneal epithelium |
corneal epithelial cell |
corneal endothelium |
corneal endothelial cell |
cornea |
coracoradialis |
coracoid foramen |
coracoid |
copula 2 |
copula 1 |
copula |
CoPA |
continuous blood vessel endothelium |
constrictor dorsalis |
connective tissue cell |
cone retinal bipolar cell |
concurrent branch afferent branchial artery |
compound organ component |
compound organ |
compact layer of ventricle |
communicating vessel palatocerebral artery |
common myeloid progenitor |
common lymphoid progenitor |
common crus |
common cardinal vein |
common bile duct |
commissure of the secondary gustatory nucleus |
commissure of the caudal tuberculum |
commissure infima of Haller |
commissura rostral, pars ventralis |
commissura rostral, pars dorsalis |
commissura cerebelli |
comma-shaped body |
columnar/cuboidal epithelial cell |
columnar chondrocyte |
collecting duct |
collagen secreting cell |
collagenous dermal stroma |
CoLA |
coelom |
CoBL |
CoB |
CNS short range interneuron |
CNS neuron (sensu Vertebrata) |
CNS long range interneuron |
CNS interneuron |
cloacal epithelium |
cloacal chamber |
cloaca |
climbing fiber |
cleithrum-vertebral ligament |
cleithrum |
cleft cell |
claustrum cartilage |
claustrum bone |
circulus |
circulating cell |
ciliated olfactory receptor neuron |
ciliated epithelial cell |
ciliated cell |
ciliary zone |
ciliary marginal zone |
CiD |
CiA |
chromaffin cell |
choroid plexus vascular circuit |
choroid plexus third ventricle |
choroid plexus telencephalic ventricle |
choroid plexus tectal ventricle |
choroid plexus fourth ventricle |
choroid plexus epithelial cell |
choroid plexus |
choroidal fissure |
choroidal cell of the eye |
chorion |
chordo neural hinge |
chondrocyte |
chondrocranium cartilage |
chondrocranium |
chondroblast |
chondral bone |
cholinergic neuron |
cholangiocyte |
chemoreceptor cell |
cerebrospinal fluid secreting cell |
cerebral spinal fluid |
cerebellum |
cerebellovestibular tract |
cerebellar white matter |
cerebellar granule cell |
cerebellar crest |
cerebellar central artery |
ceratohyal-ventral hypohyal joint |
ceratohyal-dorsal hypohyal joint |
ceratohyal cartilage |
ceratohyal-branchiostegal ray joint |
ceratohyal bone |
ceratobranchial cartilage |
ceratobranchial bone |
ceratobranchial 5 tooth |
ceratobranchial 5 ligament |
ceratobranchial 5 cartilage |
ceratobranchial 5 bone |
ceratobranchial 4 cartilage |
ceratobranchial 4 bone |
ceratobranchial 3 cartilage |
ceratobranchial 3 bone |
ceratobranchial 2 cartilage |
ceratobranchial 2 bone |
ceratobranchial 1 cartilage |
ceratobranchial 1 bone |
cephalic musculature |
cephalic flexure |
centrum |
central zone protoglomerulus 5 |
central zone protoglomerulus 4 |
central zone protoglomerulus 3 |
central zone protoglomerulus 2 |
central zone protoglomerulus 1 |
central zone protoglomerulus |
central zone olfactory bulb |
central zone of the optic tectum |
central zone of dorsal telencephalon |
central vein |
central ray artery |
central pretectum |
central pretectal nucleus |
central nucleus torus semicircularis |
central nucleus of ventral telencephalon |
central nucleus inferior lobe |
central nervous system |
central chamber of the maxillary blood sinus |
central caudal thalamic nucleus |
central cardiac conduction system |
central canal |
central artery |
cementocyte |
cementoblast |
cell |
celiacomesenteric artery |
cavitated compound organ |
CaV |
caudal zone of dorsal telencephalon |
caudal vertebra |
caudal vein plexus |
caudal vein |
caudal tuberculum |
caudal tuberal nucleus |
caudal thalamic nucleus |
caudal root of abducens nerve |
caudal pretectal nucleus |
caudal preglomerular nucleus |
caudal periventricular hypothalamus |
caudal peduncle |
caudal parvocellular preoptic nucleus |
caudal octavolateralis nucleus |
caudal octaval nucleus |
caudal octaval nerve motor nucleus |
caudal oblique |
caudal motor nucleus |
caudal mesencephalo-cerebellar tract |
caudal levator |
caudal hypothalamic zone |
caudal fin ventral procurrent ray |
caudal fin vasculature |
caudal fin upper lobe |
caudal fin skeleton |
caudal fin procurrent ray |
caudal fin principal ray 9 |
caudal fin principal ray 8 |
caudal fin principal ray 7 |
caudal fin principal ray 6 |
caudal fin principal ray 5 |
caudal fin principal ray 4 |
caudal fin principal ray 3 |
caudal fin principal ray 2 |
caudal fin principal ray 19 |
caudal fin principal ray 18 |
caudal fin principal ray 17 |
caudal fin principal ray 16 |
caudal fin principal ray 15 |
caudal fin principal ray 14 |
caudal fin principal ray 13 |
caudal fin principal ray 12 |
caudal fin principal ray 11 |
caudal fin principal ray 10 |
caudal fin principal ray 1 |
caudal fin principal ray |
caudal fin musculature |
caudal fin lymph vessel |
caudal fin lower lobe |
caudal fin lepidotrichium |
caudal fin fat |
caudal fin dorsal procurrent ray |
caudal fin blood vessel |
caudal fin actinotrichium |
caudal fin |
caudal division of the internal carotid artery |
caudal commissure |
caudal artery |
cartilaginous joint |
cartilage tissue |
cartilage element |
carotid artery |
cardiovascular system |
cardinal system |
cardiac ventricle |
cardiac neural crest |
cardiac muscle myoblast |
cardiac muscle cell |
cardiac muscle |
cardiac mesenchymal cell |
cardiac jelly |
cardiac conduction system |
CaP motoneuron |
capillary loop nephron |
capillary |
calcitonin secreting cell |
Cajal-Retzius cell |
CaD |
bulbus arteriosus outer layer |
bulbus arteriosus middle layer |
bulbus arteriosus inner layer |
bulbus arteriosus |
bulbo-spinal tract |
brush border epithelial cell |
Bruch's membrane |
breeding tubercle |
branchiostegal ray 3 |
branchiostegal ray 2 |
branchiostegal ray 1 |
branchiostegal ray |
branchiostegal membrane |
branchiomotor neuron |
branchial muscle |
branchial mesenchyme |
branched dorsal fin ray |
branched caudal fin ray |
branched anal fin ray |
brain vasculature |
brainstem and spinal white matter |
brainstem |
brain nucleus |
brain |
Brachet's cleft |
Bowman's layer |
bony shelf above orbit |
bony projection |
bony plate |
bone tissue |
bone element |
blue sensitive photoreceptor cell |
blood vessel endothelium |
blood vessel endothelial cell |
blood vessel |
blood vasculature |
blood sinus cavity |
blood sinus |
blood plasma |
blood island |
blood cell |
blood |
blastomere |
blastodisc |
blastoderm cell |
blastoderm |
blastemal cell |
blastema |
bipolar neuron |
biogenic amine secreting cell |
bile ductule |
bile canaliculus |
bifurcate interneuron |
Bergmann glial cell |
B cell |
basophilic erythroblast |
basket cell |
basiventral |
basipterygium cartilage |
basipterygium |
basioccipital-prootic joint |
basioccipital posterodorsal region |
basioccipital-exoccipital joint |
basioccipital |
basilar artery |
basihyal cartilage |
basihyal bone |
basidorsal |
basicapsular fenestra |
basibranchial 4 |
basibranchial 3 |
basibranchial 2 |
basibranchial 1 |
basibranchial |
basal regeneration epithelium |
basal plate midbrain region |
basal plate cartilage |
basal layer breeding tubercle |
basal lamina |
basal communicating artery |
barrier epithelial cell |
barrier cell |
barbel primordium |
barbel |
band form neutrophil |
ball |
axis |
axial vasculature |
axial mesoderm |
axial lymph vessel |
axial hypoblast |
axial fin skeleton |
axial chorda mesoderm |
axial blood vessel |
autopalatine-vomer joint |
autopalatine-preethmoid joint |
autopalatine-maxillary joint |
autopalatine-lateral ethmoid joint |
autopalatine |
autonomic neuron |
autonomic nervous system |
auditory receptor cell |
auditory foramen |
auditory fenestra |
auditory epithelial support cell |
auditory capsule |
atypical epithelium |
atrium of sinus impar |
atrium |
atrioventricular valve |
atrioventricular ring |
atrioventricular node |
atrioventricular canal endocardium |
atrioventricular canal |
atrial myocardium |
atrial epicardium |
atrial endocardium |
astrocyte |
asteriscus |
articular fossa of opercle |
articular cartilage |
artery |
arteriole |
arrector muscle |
area postrema |
aqueous humor |
aponeurosis |
apical epidermal cap |
apical ectodermal ridge pelvic fin bud |
apical ectodermal ridge pelvic fin |
apical ectodermal ridge pectoral fin bud |
apical ectodermal ridge median fin fold |
apical ectodermal ridge dorsal fin |
apical ectodermal ridge |
aortic arch 6 |
aortic arch 5 |
aortic arch 4 |
aortic arch 3 |
aortic arch 2 |
aortic arch 1 |
aortic arch |
anteromedial zone olfactory bulb |
anterior ventromedial process of autopalatine |
anterior swim bladder bud |
anterior semicircular canal |
anterior segment eye |
anterior sclerotic bone |
anterior presumptive neural plate |
anterior pancreatic bud |
anterior neural tube |
anterior neural rod |
anterior neural plate |
anterior neural keel |
anterior nasal barbel |
anterior naris |
anterior myodome |
anterior mesenteric artery |
anterior mesencephalic central artery |
anterior macula |
anterior lateral process of autopalatine |
anterior lateral plate mesoderm |
anterior lateral mesoderm |
anterior lateral line system |
anterior lateral line primordium |
anterior lateral line placode |
anterior lateral line neuromast |
anterior lateral line nerve |
anterior lateral line ganglion |
anterior lateral line |
anterior dorsomedial process of autopalatine |
anterior crista primordium |
anterior crista |
anterior commissure |
anterior chamber swim bladder |
anterior cerebral vein |
anterior catecholaminergic tract |
anterior cardinal vein |
anterior axial hypoblast |
ansulate commissure |
annular ligament |
anguloarticular-retroarticular joint |
anguloarticular |
angular bone |
angiogenic sprout |
angioblastic mesenchymal cell |
androgen secreting cell |
anatomical system |
anatomical surface |
anatomical structure |
anatomical space |
anatomical line |
anatomical group |
anatomical cluster |
anal inclinator |
anal fin skeleton |
anal fin radial |
anal fin pterygiophore |
anal fin proximal radial |
anal fin musculature |
anal fin lepidotrichium 7 |
anal fin lepidotrichium 6 |
anal fin lepidotrichium 5 |
anal fin lepidotrichium 4 |
anal fin lepidotrichium 3 |
anal fin lepidotrichium 2 |
anal fin lepidotrichium 1 |
anal fin lepidotrichium |
anal fin distal radial |
anal fin actinotrichium |
anal fin |
anal erector |
anal depressor |
ampullary nerve |
amelocyte |
ameloblast |
amacrine cell |
alpha-beta T cell |
alkali secreting cell |
alar plate midbrain region |
afferent neuron |
afferent lamellar arteriole |
afferent glomerular arteriole |
afferent filamental artery |
afferent branchial artery |
adrenocorticotropic hormone secreting cell |
adrenergic neuron |
adrenal medulla cell |
adipose tissue |
adenohypophysis |
adenohypophyseal placode |
adductor profundus |
adductor operculi |
adductor muscle |
adductor mandibulae complex |
adductor mandibulae |
adductor hyomandibulae |
adductor hyohyoid |
adductor arcus palatini |
adductor |
adaxial cell |
actinotrichium |
acinar cell |
acid secreting cell |
acellular anatomical structure |
accessory pretectal nucleus |
accessory chamber of the maxillary blood sinus |
absorptive cell |
abductor profundus |
abductor muscle |
abductor hyohyoid |
abducens motor nucleus |
abdominal musculature |
Lab Name | Principal Investigator | Institution | Country |
---|---|---|---|
Zon Lab | Leonard Zon | Boston Children's Hospital | USA |
Zhang Lab | Yuji Zhang | University of Maryland | USA |
Yang Lab | Hongxing Yang | Shanghai Chenshan Botanical Garden | China |
Xu Lab | Anlong Xu | School of Life Sciences, Sun Yat-sen University | China |
Xie Lab | Wei Xie | Tsinghua University, Beijing | China |
Wong lab | Ryan Y. Wong | University of Nebraska Omaha | USA |
Winata Lab | Cecilia Winata | IIMCB Warsaw | Poland |
Wei Lab | Chunyao Wei | Vanderbilt University | USA |
Wardle Lab | Fiona Wardle | King's College London | England |
Vastenhouw lab | Nadine Vastenhouw | Max Planck Institute of Molecular Cell Biology and Genetics | Germany |
Vaquerizas Lab | Juan M. Vaquerizas | Max Planck Institute for Molecular Biomedicine | Germany |
Strahle Lab | Uwe Strähle | Karlsruhe Institute of Technology | Germany |
Stainier Lab | Didier Stainier | Max Planck Institute For Heart and Lung Research | Germany |
Skarmeta Lab | José Luis Gómez-Skarmeta | Centro Andaluz de Biologia del Desarrollo | Spain |
Shkumatava Lab | Alena Shkumatava | Institut Curie | France |
Schier Lab | Alex Schier | Harvard University | USA |
Sauka-Spengler Lab | Tatjana Sauka-Spengler | University of Oxford | UK |
Sadler Lab | Kirsten Sadler Edepli | New York University Abu Dhabi | United Arab Emirates |
Rotterdam Genomics core | — | Erasmus MC | The Netherlands |
RIKEN | Piero Carninci | RIKEN | Japan |
Postlethwait Lab | John H. Postlethwait | Institute of Neuroscience, University of Oregon | USA |
Peers Lab | Bernard Peers | University of Liege | Belgium |
Pandey Lab | Akhilesh Pandey | Johns Hopkins University School of Medicine | USA |
Onichtchouk Lab | Daria Onichtchouk | University of Freiburg | Germany |
Novogene | - | - | China |
NGI Sweden | Carsten Daub | National Genomic Infrastructure | Sweden |
Mueller lab | Ferenc Mueller | University of Birmingham | UK |
MRC-CSC Genomics facility | — | MRC-CSC | UK |
Mathavan Lab | Sinnakaruppan Mathavan | NTU Medical School | Singapore |
Liu Lab | Jiang Liu | Beijing Institute of Genomics, CAS | China |
Lister lab | Ryan Lister | University of Western Australia | Australia |
Liangbiao Lab | Chen Liangbiao | Shanghai Ocean University | China |
Lenhard Lab | Boris Lenhard | Imperial College London | UK |
Lawson Lab | Nathan D. Lawson | University of Massachusetts Medical School | USA |
Klose Lab | Rob Klose | University of Oxford | UK |
Kere Lab | Juha Kere | Karolinska Institute | Sweden |
Kamminga Lab | Leonie Kamminga | Radboud University | The Netherlands |
Johns Hopkins Deep Sequencing and Microarray Core Facility | — | — | USA |
Horsfield Lab | Julia Horsfield | Department of Pathology, Dunedin School of Medicine, University of Otago | New Zealand |
Gong Lab | Zhiyuan Gong | National University of Singapore | Singapore |
Gomez Lab | Manuel J. Gomez | CNIC | Spain |
Giraldez Lab | Antonio Giraldez | Yale | USA |
Genome Technology Access Center | — | Washington University, St. Louis | USA |
GeneWiz NGS services | — | Genewiz | United States of America |
Ferrer lab | Jorge Ferrer | IDIBAPS | Spain |
Englert lab | Christoph Englert | Leibniz Institute for Age Research - Fritz Lipmann Institute | Germany |
Ekker Lab | Stephen C Ekker | Mayo Clinic, Rochester | United States of America |
Driever Lab | Wolfgang Driever | University of Freiburg | Germany |
Doe Lab | Janine Doe | ISS | Space |
de Wit Lab | Elzo de Wit | Division Of Gene Regulation, Netherlands Cancer Institute | The Netherlands |
Daub Lab | Carsten Daub | KI | Sweden |
Chatterjee Lab | Aniruddha Chatterjee | Department of Pathology, Dunedin School of Medicine, University of Otago | New Zealand |
Cairns Lab | Brad Cairns | HHMI | USA |
Busch-Nentwich Lab | Elisabeth Busch-Nentwich | Wellcome Trust Sanger Institute | UK |
Bobe lab | Julien Bobe | Laboratoire de Physiologie et Genomique des Poissons, INRA, Rennes | France |
Barts and The London Genome Center | — | Queen Mary University of London | UK |
Bartel Lab | David P. Bartel | Whitehead Institute for Biomedical Research | USA |
Alestrom Lab | Peter Alestrom | Norwegian University of Life Sciences | Norway |
Name |
---|
TAB-seq |
STARR-seq |
small-RNA-seq |
SELEX-seq |
SAPAS |
RRBS |
RNA-seq |
RIP-seq |
Ribo-seq |
PAS-seq |
PAR-Clip-seq |
PAL-seq |
mRNA-seq |
MNase-seq |
miRNA-seq |
MethylC-seq |
MethylCap-seq |
MeDIP-seq |
iCLIP-seq |
Hi-C |
GRO-seq |
FAIRE-seq |
DNAse-seq |
ChIP-seq |
ChIP-exo-seq |
ChIA-PET |
Capture-C |
CAGE-seq |
BS-seq |
Bru-seq |
ATAC-seq |
4C-seq |
3P-seq |
Name |
---|
Sphere |
Shield |
Protruding-mouth |
Prim-5 |
Prim-25 |
Prim-15 |
Pec-fin |
Oblong |
Long-pec |
High-pec |
High |
Germ-ring |
Dome |
Days 7-13 |
Days 45-89 |
Days 30-44 |
Days 21-29 |
Days 14-20 |
Day 6 |
Day 5 |
Day 4 |
Bud |
90%-epiboly |
90 Days-2 Years |
8-cell |
75%-epiboly |
64-cell |
5-9 somites |
512-cell |
50%-epiboly |
4-cell |
32-cell |
30%-epiboly |
2-cell |
26+ somites |
256-cell |
20-25 somites |
1k-cell |
1-cell |
16-cell |
1-4 somites |
14-19 somites |
128-cell |
10-13 somites |
Name |
---|
WT |
WIK/AB |
WIK |
TU/TL |
TU |
TL/TLF |
TLN |
TL |
SPF AB |
SPF 5-D |
SJD/C32 |
SJD |
SJA |
SING |
SH |
SAT |
RW |
NHGRI-1 |
NA |
LSB |
KOLN |
INDO |
IND |
HSB |
HLF |
HK/SING |
HK/AB |
HK |
EKW |
DAR |
crossbreed |
C32 |
AB/TU |
AB/TL |
AB/PS |
AB/EKW |
AB/C32 |
AB |
Name |
---|
NextSeq 500 Mid-Output |
NextSeq 500 High-Output |
MiSeq v3 |
Li-Cor 4300 DNA Analysis System |
HiSeq X Ten |
HiSeq Rapid Run |
HiSeq High-Output v4 |
HiSeq High-Output v3 |
HiSeq 5000 |
HiSeq 4000 |
HiSeq 3000 |
HiSeq 2500 |
HiSeq 2000 |
HiSeq 1500 |
HiSeq 1000 |
HiScanSQ |
Genome Sequence FLX+ / FLX |
Genome Sequence 20 |
GAIIx |
AB SOLiD System |
ABI 377 automated sequencer |
Name |
---|
SOLiD |
Roche 454 |
PacBio |
Ion |
Illumina |
Name |
---|
m |
f |
Name |
---|
unstranded |
reverse |
forward |