Series Summary for DCD000394SR

RNA-seq data from pancreatic cells: Transcriptome analysis of pancreatic cells across distant species highlights novel important regulator genes

Survey

10.1186/s12915-017-0362-x

PRJEB10140

Defining the transcriptome and the genetic pathways of pancreatic cells is of great interest for elucidating the molecular attributes of pancreas disorders such as diabetes and cancer. As the function of the different pancreatic cell types has been maintained during vertebrate evolution, the comparison of their transcriptomes across distant vertebrate species is a means to pinpoint genes under strong evolutionary constraints due to their crucial function, which have therefore preserved their selective expression in these pancreatic cell types.

True

mickael.dong

Jan. 12, 2018, 7:43 a.m.

Nov. 15, 2018, 6:34 a.m.

Assays

Biosample ID Series biosample_type biosample_lab genetic_background stage Anatomical Term Hours Post Fertilization
DCD007084BS DCD000394SR tissue Peers Lab, University of Liege AB 90 Days-2 Years pancreatic B cell adult
Applied Assay ID Biosample Replicate Assay
DCD002123AA DCD013714BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002494SQ DCD002520TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008046DT: FASTQ
DCD008775DT: BIGWIG GRCz10/danRer10
DCD010187DT: LOG GRCz10/danRer10
DCD010189DT: TSV GRCz10/danRer10
DCD010190DT: TSV GRCz10/danRer10
DCD010191DT: BEDGRAPH GRCz10/danRer10
DCD010192DT: BEDGRAPH GRCz10/danRer10
DCD010193DT: BEDGRAPH GRCz10/danRer10
DCD010194DT: BEDGRAPH GRCz10/danRer10
DCD010195DT: PDF GRCz10/danRer10
DCD010196DT: LOG GRCz10/danRer10
DCD010197DT: PDF GRCz10/danRer10
DCD010198DT: LOG GRCz10/danRer10
DCD010214DT: BAM GRCz10/danRer10
DCD013022DT: LOG GRCz11/danRer11
DCD013023DT: TSV GRCz11/danRer11
DCD013024DT: TSV GRCz11/danRer11
DCD013026DT: BEDGRAPH GRCz11/danRer11
DCD013027DT: BIGWIG GRCz11/danRer11
DCD013028DT: PDF GRCz11/danRer11
DCD013029DT: LOG GRCz11/danRer11
DCD013030DT: PDF GRCz11/danRer11
DCD013031DT: LOG GRCz11/danRer11
DCD013032DT: BEDGRAPH GRCz11/danRer11
DCD013047DT: BAM GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002493SQ DCD002519TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008045DT: FASTQ
DCD008846DT: BIGWIG GRCz10/danRer10
DCD009251DT: LOG GRCz10/danRer10
DCD009253DT: TSV GRCz10/danRer10
DCD009254DT: TSV GRCz10/danRer10
DCD009256DT: BEDGRAPH GRCz10/danRer10
DCD009257DT: BEDGRAPH GRCz10/danRer10
DCD009258DT: PDF GRCz10/danRer10
DCD009259DT: LOG GRCz10/danRer10
DCD009260DT: BEDGRAPH GRCz10/danRer10
DCD009261DT: PDF GRCz10/danRer10
DCD009262DT: LOG GRCz10/danRer10
DCD009263DT: BEDGRAPH GRCz10/danRer10
DCD009305DT: BAM GRCz10/danRer10
DCD013011DT: LOG GRCz11/danRer11
DCD013012DT: TSV GRCz11/danRer11
DCD013013DT: TSV GRCz11/danRer11
DCD013016DT: BIGWIG GRCz11/danRer11
DCD013017DT: PDF GRCz11/danRer11
DCD013018DT: LOG GRCz11/danRer11
DCD013019DT: PDF GRCz11/danRer11
DCD013020DT: LOG GRCz11/danRer11
DCD013021DT: BEDGRAPH GRCz11/danRer11
DCD013025DT: BEDGRAPH GRCz11/danRer11
DCD013092DT: BAM GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD002124AA DCD013715BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002496SQ DCD002522TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008048DT: FASTQ
DCD008861DT: BIGWIG GRCz10/danRer10
DCD009203DT: LOG GRCz10/danRer10
DCD009204DT: TSV GRCz10/danRer10
DCD009205DT: TSV GRCz10/danRer10
DCD009207DT: BEDGRAPH GRCz10/danRer10
DCD009208DT: BEDGRAPH GRCz10/danRer10
DCD009209DT: BEDGRAPH GRCz10/danRer10
DCD009210DT: PDF GRCz10/danRer10
DCD009211DT: LOG GRCz10/danRer10
DCD009212DT: BEDGRAPH GRCz10/danRer10
DCD009213DT: PDF GRCz10/danRer10
DCD009214DT: LOG GRCz10/danRer10
DCD009244DT: BAM GRCz10/danRer10
DCD013044DT: LOG GRCz11/danRer11
DCD013045DT: TSV GRCz11/danRer11
DCD013046DT: TSV GRCz11/danRer11
DCD013048DT: BEDGRAPH GRCz11/danRer11
DCD013049DT: BIGWIG GRCz11/danRer11
DCD013050DT: PDF GRCz11/danRer11
DCD013051DT: LOG GRCz11/danRer11
DCD013052DT: PDF GRCz11/danRer11
DCD013053DT: LOG GRCz11/danRer11
DCD013054DT: BEDGRAPH GRCz11/danRer11
DCD013081DT: BAM GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002495SQ DCD002521TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008047DT: FASTQ
DCD008834DT: BIGWIG GRCz10/danRer10
DCD009539DT: LOG GRCz10/danRer10
DCD009540DT: TSV GRCz10/danRer10
DCD009541DT: TSV GRCz10/danRer10
DCD009542DT: BEDGRAPH GRCz10/danRer10
DCD009543DT: BEDGRAPH GRCz10/danRer10
DCD009544DT: BAM GRCz10/danRer10
DCD009545DT: BEDGRAPH GRCz10/danRer10
DCD009546DT: PDF GRCz10/danRer10
DCD009548DT: BEDGRAPH GRCz10/danRer10
DCD009549DT: LOG GRCz10/danRer10
DCD009550DT: PDF GRCz10/danRer10
DCD009552DT: LOG GRCz10/danRer10
DCD013034DT: LOG GRCz11/danRer11
DCD013035DT: TSV GRCz11/danRer11
DCD013036DT: TSV GRCz11/danRer11
DCD013037DT: BEDGRAPH GRCz11/danRer11
DCD013038DT: BEDGRAPH GRCz11/danRer11
DCD013039DT: PDF GRCz11/danRer11
DCD013040DT: BIGWIG GRCz11/danRer11
DCD013041DT: LOG GRCz11/danRer11
DCD013042DT: PDF GRCz11/danRer11
DCD013043DT: LOG GRCz11/danRer11
DCD013058DT: BAM GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD002125AA DCD013716BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002497SQ DCD002523TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008049DT: FASTQ
DCD008850DT: BIGWIG GRCz10/danRer10
DCD009191DT: LOG GRCz10/danRer10
DCD009192DT: TSV GRCz10/danRer10
DCD009193DT: TSV GRCz10/danRer10
DCD009194DT: BEDGRAPH GRCz10/danRer10
DCD009195DT: BEDGRAPH GRCz10/danRer10
DCD009196DT: BEDGRAPH GRCz10/danRer10
DCD009197DT: BEDGRAPH GRCz10/danRer10
DCD009199DT: PDF GRCz10/danRer10
DCD009200DT: LOG GRCz10/danRer10
DCD009201DT: PDF GRCz10/danRer10
DCD009202DT: LOG GRCz10/danRer10
DCD009252DT: BAM GRCz10/danRer10
DCD013055DT: LOG GRCz11/danRer11
DCD013056DT: TSV GRCz11/danRer11
DCD013057DT: TSV GRCz11/danRer11
DCD013060DT: BEDGRAPH GRCz11/danRer11
DCD013061DT: PDF GRCz11/danRer11
DCD013062DT: LOG GRCz11/danRer11
DCD013063DT: PDF GRCz11/danRer11
DCD013064DT: LOG GRCz11/danRer11
DCD013065DT: BIGWIG GRCz11/danRer11
DCD013069DT: BEDGRAPH GRCz11/danRer11
DCD013136DT: BAM GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Anatomical Term Hours Post Fertilization
DCD007085BS DCD000394SR tissue Peers Lab, University of Liege AB 90 Days-2 Years pancreatic A cell adult
Applied Assay ID Biosample Replicate Assay
DCD002126AA DCD013717BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002499SQ DCD002525TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008051DT: FASTQ
DCD008845DT: BIGWIG GRCz10/danRer10
DCD009337DT: LOG GRCz10/danRer10
DCD009338DT: TSV GRCz10/danRer10
DCD009339DT: TSV GRCz10/danRer10
DCD009340DT: BEDGRAPH GRCz10/danRer10
DCD009341DT: BEDGRAPH GRCz10/danRer10
DCD009342DT: BEDGRAPH GRCz10/danRer10
DCD009343DT: LOG GRCz10/danRer10
DCD009344DT: PDF GRCz10/danRer10
DCD009345DT: LOG GRCz10/danRer10
DCD009346DT: PDF GRCz10/danRer10
DCD009347DT: BEDGRAPH GRCz10/danRer10
DCD009367DT: BAM GRCz10/danRer10
DCD013077DT: LOG GRCz11/danRer11
DCD013078DT: TSV GRCz11/danRer11
DCD013079DT: TSV GRCz11/danRer11
DCD013080DT: BEDGRAPH GRCz11/danRer11
DCD013082DT: BIGWIG GRCz11/danRer11
DCD013083DT: PDF GRCz11/danRer11
DCD013084DT: LOG GRCz11/danRer11
DCD013085DT: PDF GRCz11/danRer11
DCD013086DT: LOG GRCz11/danRer11
DCD013091DT: BEDGRAPH GRCz11/danRer11
DCD013114DT: BAM GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002498SQ DCD002524TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008050DT: FASTQ
DCD008839DT: BIGWIG GRCz10/danRer10
DCD009384DT: LOG GRCz10/danRer10
DCD009385DT: TSV GRCz10/danRer10
DCD009386DT: TSV GRCz10/danRer10
DCD009388DT: BEDGRAPH GRCz10/danRer10
DCD009389DT: BEDGRAPH GRCz10/danRer10
DCD009390DT: BEDGRAPH GRCz10/danRer10
DCD009391DT: PDF GRCz10/danRer10
DCD009392DT: LOG GRCz10/danRer10
DCD009393DT: PDF GRCz10/danRer10
DCD009394DT: BEDGRAPH GRCz10/danRer10
DCD009395DT: LOG GRCz10/danRer10
DCD009407DT: BAM GRCz10/danRer10
DCD013066DT: LOG GRCz11/danRer11
DCD013067DT: TSV GRCz11/danRer11
DCD013068DT: TSV GRCz11/danRer11
DCD013070DT: BEDGRAPH GRCz11/danRer11
DCD013071DT: BIGWIG GRCz11/danRer11
DCD013072DT: PDF GRCz11/danRer11
DCD013073DT: LOG GRCz11/danRer11
DCD013074DT: PDF GRCz11/danRer11
DCD013075DT: LOG GRCz11/danRer11
DCD013076DT: BEDGRAPH GRCz11/danRer11
DCD013087DT: BAM GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD002127AA DCD013718BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002501SQ DCD002527TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008053DT: FASTQ
DCD008847DT: BIGWIG GRCz10/danRer10
DCD009312DT: LOG GRCz10/danRer10
DCD009313DT: TSV GRCz10/danRer10
DCD009314DT: TSV GRCz10/danRer10
DCD009315DT: BEDGRAPH GRCz10/danRer10
DCD009316DT: BEDGRAPH GRCz10/danRer10
DCD009318DT: PDF GRCz10/danRer10
DCD009319DT: LOG GRCz10/danRer10
DCD009320DT: BEDGRAPH GRCz10/danRer10
DCD009321DT: BEDGRAPH GRCz10/danRer10
DCD009322DT: LOG GRCz10/danRer10
DCD009323DT: PDF GRCz10/danRer10
DCD009349DT: BAM GRCz10/danRer10
DCD013099DT: LOG GRCz11/danRer11
DCD013100DT: TSV GRCz11/danRer11
DCD013101DT: TSV GRCz11/danRer11
DCD013103DT: BEDGRAPH GRCz11/danRer11
DCD013104DT: BIGWIG GRCz11/danRer11
DCD013105DT: PDF GRCz11/danRer11
DCD013106DT: LOG GRCz11/danRer11
DCD013107DT: PDF GRCz11/danRer11
DCD013108DT: LOG GRCz11/danRer11
DCD013109DT: BEDGRAPH GRCz11/danRer11
DCD013144DT: BAM GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002500SQ DCD002526TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008052DT: FASTQ
DCD008842DT: BIGWIG GRCz10/danRer10
DCD009373DT: LOG GRCz10/danRer10
DCD009374DT: TSV GRCz10/danRer10
DCD009375DT: TSV GRCz10/danRer10
DCD009376DT: BEDGRAPH GRCz10/danRer10
DCD009377DT: BEDGRAPH GRCz10/danRer10
DCD009378DT: PDF GRCz10/danRer10
DCD009379DT: BEDGRAPH GRCz10/danRer10
DCD009380DT: LOG GRCz10/danRer10
DCD009381DT: PDF GRCz10/danRer10
DCD009382DT: BEDGRAPH GRCz10/danRer10
DCD009383DT: LOG GRCz10/danRer10
DCD009397DT: BAM GRCz10/danRer10
DCD013088DT: LOG GRCz11/danRer11
DCD013089DT: TSV GRCz11/danRer11
DCD013090DT: TSV GRCz11/danRer11
DCD013093DT: BIGWIG GRCz11/danRer11
DCD013094DT: PDF GRCz11/danRer11
DCD013095DT: LOG GRCz11/danRer11
DCD013096DT: PDF GRCz11/danRer11
DCD013097DT: LOG GRCz11/danRer11
DCD013098DT: BEDGRAPH GRCz11/danRer11
DCD013102DT: BEDGRAPH GRCz11/danRer11
DCD013115DT: BAM GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD002128AA DCD013719BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002502SQ DCD002528TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008054DT: FASTQ
DCD008854DT: BIGWIG GRCz10/danRer10
DCD009179DT: LOG GRCz10/danRer10
DCD009180DT: TSV GRCz10/danRer10
DCD009181DT: TSV GRCz10/danRer10
DCD009182DT: BEDGRAPH GRCz10/danRer10
DCD009184DT: BEDGRAPH GRCz10/danRer10
DCD009185DT: BEDGRAPH GRCz10/danRer10
DCD009186DT: PDF GRCz10/danRer10
DCD009187DT: LOG GRCz10/danRer10
DCD009188DT: BEDGRAPH GRCz10/danRer10
DCD009189DT: PDF GRCz10/danRer10
DCD009190DT: LOG GRCz10/danRer10
DCD009226DT: BAM GRCz10/danRer10
DCD013110DT: LOG GRCz11/danRer11
DCD013111DT: TSV GRCz11/danRer11
DCD013112DT: TSV GRCz11/danRer11
DCD013113DT: BEDGRAPH GRCz11/danRer11
DCD013116DT: PDF GRCz11/danRer11
DCD013117DT: LOG GRCz11/danRer11
DCD013118DT: PDF GRCz11/danRer11
DCD013119DT: LOG GRCz11/danRer11
DCD013120DT: BIGWIG GRCz11/danRer11
DCD013131DT: BEDGRAPH GRCz11/danRer11
DCD013199DT: BAM GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Anatomical Term Hours Post Fertilization
DCD007086BS DCD000394SR tissue Peers Lab, University of Liege AB 90 Days-2 Years pancreatic D cell adult
Applied Assay ID Biosample Replicate Assay
DCD002129AA DCD013720BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002504SQ DCD002530TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008056DT: FASTQ
DCD008853DT: BIGWIG GRCz10/danRer10
DCD009264DT: LOG GRCz10/danRer10
DCD009265DT: TSV GRCz10/danRer10
DCD009266DT: TSV GRCz10/danRer10
DCD009267DT: BEDGRAPH GRCz10/danRer10
DCD009268DT: BEDGRAPH GRCz10/danRer10
DCD009269DT: BEDGRAPH GRCz10/danRer10
DCD009271DT: BEDGRAPH GRCz10/danRer10
DCD009272DT: PDF GRCz10/danRer10
DCD009273DT: LOG GRCz10/danRer10
DCD009274DT: PDF GRCz10/danRer10
DCD009275DT: LOG GRCz10/danRer10
DCD009298DT: BAM GRCz10/danRer10
DCD013132DT: LOG GRCz11/danRer11
DCD013133DT: TSV GRCz11/danRer11
DCD013134DT: TSV GRCz11/danRer11
DCD013137DT: BEDGRAPH GRCz11/danRer11
DCD013138DT: PDF GRCz11/danRer11
DCD013139DT: LOG GRCz11/danRer11
DCD013140DT: PDF GRCz11/danRer11
DCD013141DT: BIGWIG GRCz11/danRer11
DCD013142DT: LOG GRCz11/danRer11
DCD013147DT: BEDGRAPH GRCz11/danRer11
DCD013170DT: BAM GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002503SQ DCD002529TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008055DT: FASTQ
DCD008772DT: BIGWIG GRCz10/danRer10
DCD010176DT: LOG GRCz10/danRer10
DCD010177DT: TSV GRCz10/danRer10
DCD010178DT: TSV GRCz10/danRer10
DCD010179DT: BEDGRAPH GRCz10/danRer10
DCD010180DT: BEDGRAPH GRCz10/danRer10
DCD010181DT: BEDGRAPH GRCz10/danRer10
DCD010182DT: PDF GRCz10/danRer10
DCD010183DT: LOG GRCz10/danRer10
DCD010185DT: PDF GRCz10/danRer10
DCD010186DT: LOG GRCz10/danRer10
DCD010188DT: BEDGRAPH GRCz10/danRer10
DCD010203DT: BAM GRCz10/danRer10
DCD013121DT: LOG GRCz11/danRer11
DCD013122DT: TSV GRCz11/danRer11
DCD013123DT: TSV GRCz11/danRer11
DCD013124DT: BEDGRAPH GRCz11/danRer11
DCD013125DT: BEDGRAPH GRCz11/danRer11
DCD013126DT: BIGWIG GRCz11/danRer11
DCD013127DT: PDF GRCz11/danRer11
DCD013128DT: LOG GRCz11/danRer11
DCD013129DT: PDF GRCz11/danRer11
DCD013130DT: LOG GRCz11/danRer11
DCD013135DT: BAM GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD002130AA DCD013721BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002505SQ DCD002531TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008057DT: FASTQ
DCD008844DT: BIGWIG GRCz10/danRer10
DCD009324DT: LOG GRCz10/danRer10
DCD009325DT: TSV GRCz10/danRer10
DCD009327DT: TSV GRCz10/danRer10
DCD009329DT: BEDGRAPH GRCz10/danRer10
DCD009330DT: BEDGRAPH GRCz10/danRer10
DCD009331DT: BEDGRAPH GRCz10/danRer10
DCD009332DT: LOG GRCz10/danRer10
DCD009333DT: PDF GRCz10/danRer10
DCD009334DT: PDF GRCz10/danRer10
DCD009335DT: LOG GRCz10/danRer10
DCD009336DT: BEDGRAPH GRCz10/danRer10
DCD009351DT: BAM GRCz10/danRer10
DCD013143DT: LOG GRCz11/danRer11
DCD013145DT: TSV GRCz11/danRer11
DCD013146DT: TSV GRCz11/danRer11
DCD013148DT: BIGWIG GRCz11/danRer11
DCD013149DT: PDF GRCz11/danRer11
DCD013150DT: LOG GRCz11/danRer11
DCD013151DT: PDF GRCz11/danRer11
DCD013152DT: LOG GRCz11/danRer11
DCD013153DT: BEDGRAPH GRCz11/danRer11
DCD013157DT: BEDGRAPH GRCz11/danRer11
DCD013197DT: BAM GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD002131AA DCD013722BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002506SQ DCD002532TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008058DT: FASTQ
DCD008858DT: BIGWIG GRCz10/danRer10
DCD009167DT: LOG GRCz10/danRer10
DCD009168DT: TSV GRCz10/danRer10
DCD009169DT: TSV GRCz10/danRer10
DCD009170DT: BEDGRAPH GRCz10/danRer10
DCD009172DT: BEDGRAPH GRCz10/danRer10
DCD009173DT: BEDGRAPH GRCz10/danRer10
DCD009174DT: PDF GRCz10/danRer10
DCD009175DT: LOG GRCz10/danRer10
DCD009176DT: PDF GRCz10/danRer10
DCD009177DT: LOG GRCz10/danRer10
DCD009178DT: BEDGRAPH GRCz10/danRer10
DCD009198DT: BAM GRCz10/danRer10
DCD013154DT: LOG GRCz11/danRer11
DCD013155DT: TSV GRCz11/danRer11
DCD013156DT: TSV GRCz11/danRer11
DCD013158DT: BEDGRAPH GRCz11/danRer11
DCD013159DT: BIGWIG GRCz11/danRer11
DCD013160DT: BEDGRAPH GRCz11/danRer11
DCD013161DT: PDF GRCz11/danRer11
DCD013162DT: LOG GRCz11/danRer11
DCD013163DT: PDF GRCz11/danRer11
DCD013164DT: LOG GRCz11/danRer11
DCD013235DT: BAM GRCz11/danRer11
Biosample ID Series biosample_type biosample_lab genetic_background stage Controlled By Anatomical Term Treatment Hours Post Fertilization Mutation Description
DCD007087BS DCD000394SR tissue Peers Lab, University of Liege AB 90 Days-2 Years pancreatic acinar cell adult
Applied Assay ID Biosample Replicate Assay
DCD002132AA DCD013723BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002508SQ DCD002534TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008060DT: FASTQ
DCD008855DT: BIGWIG GRCz10/danRer10
DCD009215DT: LOG GRCz10/danRer10
DCD009216DT: TSV GRCz10/danRer10
DCD009217DT: TSV GRCz10/danRer10
DCD009218DT: BEDGRAPH GRCz10/danRer10
DCD009219DT: BEDGRAPH GRCz10/danRer10
DCD009220DT: BEDGRAPH GRCz10/danRer10
DCD009221DT: BEDGRAPH GRCz10/danRer10
DCD009222DT: PDF GRCz10/danRer10
DCD009223DT: LOG GRCz10/danRer10
DCD009224DT: PDF GRCz10/danRer10
DCD009225DT: LOG GRCz10/danRer10
DCD009255DT: BAM GRCz10/danRer10
DCD013176DT: LOG GRCz11/danRer11
DCD013177DT: TSV GRCz11/danRer11
DCD013178DT: TSV GRCz11/danRer11
DCD013179DT: BEDGRAPH GRCz11/danRer11
DCD013180DT: BEDGRAPH GRCz11/danRer11
DCD013181DT: BIGWIG GRCz11/danRer11
DCD013182DT: PDF GRCz11/danRer11
DCD013183DT: LOG GRCz11/danRer11
DCD013184DT: PDF GRCz11/danRer11
DCD013185DT: LOG GRCz11/danRer11
DCD013230DT: BAM GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002507SQ DCD002533TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008059DT: FASTQ
DCD008745DT: BIGWIG GRCz10/danRer10
DCD010513DT: LOG GRCz10/danRer10
DCD010514DT: TSV GRCz10/danRer10
DCD010515DT: TSV GRCz10/danRer10
DCD010516DT: BEDGRAPH GRCz10/danRer10
DCD010517DT: BEDGRAPH GRCz10/danRer10
DCD010518DT: PDF GRCz10/danRer10
DCD010519DT: BEDGRAPH GRCz10/danRer10
DCD010520DT: BEDGRAPH GRCz10/danRer10
DCD010521DT: LOG GRCz10/danRer10
DCD010522DT: PDF GRCz10/danRer10
DCD010523DT: LOG GRCz10/danRer10
DCD010540DT: BAM GRCz10/danRer10
DCD013165DT: LOG GRCz11/danRer11
DCD013166DT: TSV GRCz11/danRer11
DCD013167DT: TSV GRCz11/danRer11
DCD013168DT: BEDGRAPH GRCz11/danRer11
DCD013169DT: BEDGRAPH GRCz11/danRer11
DCD013171DT: PDF GRCz11/danRer11
DCD013172DT: BIGWIG GRCz11/danRer11
DCD013173DT: LOG GRCz11/danRer11
DCD013174DT: PDF GRCz11/danRer11
DCD013175DT: LOG GRCz11/danRer11
DCD013186DT: BAM GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD002133AA DCD013724BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002492SQ DCD002518TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008044DT: FASTQ
DCD008851DT: BIGWIG GRCz10/danRer10
DCD009287DT: LOG GRCz10/danRer10
DCD009288DT: TSV GRCz10/danRer10
DCD009289DT: TSV GRCz10/danRer10
DCD009290DT: BEDGRAPH GRCz10/danRer10
DCD009291DT: BEDGRAPH GRCz10/danRer10
DCD009292DT: BEDGRAPH GRCz10/danRer10
DCD009293DT: BEDGRAPH GRCz10/danRer10
DCD009294DT: PDF GRCz10/danRer10
DCD009295DT: LOG GRCz10/danRer10
DCD009296DT: PDF GRCz10/danRer10
DCD009297DT: LOG GRCz10/danRer10
DCD009326DT: BAM GRCz10/danRer10
DCD013000DT: LOG GRCz11/danRer11
DCD013001DT: TSV GRCz11/danRer11
DCD013002DT: TSV GRCz11/danRer11
DCD013003DT: BEDGRAPH GRCz11/danRer11
DCD013004DT: BEDGRAPH GRCz11/danRer11
DCD013005DT: BIGWIG GRCz11/danRer11
DCD013006DT: PDF GRCz11/danRer11
DCD013007DT: LOG GRCz11/danRer11
DCD013008DT: PDF GRCz11/danRer11
DCD013009DT: LOG GRCz11/danRer11
DCD013059DT: BAM GRCz11/danRer11
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002509SQ DCD002535TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008061DT: FASTQ
DCD008779DT: BIGWIG GRCz10/danRer10
DCD010141DT: LOG GRCz10/danRer10
DCD010142DT: TSV GRCz10/danRer10
DCD010143DT: TSV GRCz10/danRer10
DCD010144DT: BEDGRAPH GRCz10/danRer10
DCD010145DT: BEDGRAPH GRCz10/danRer10
DCD010146DT: BEDGRAPH GRCz10/danRer10
DCD010147DT: LOG GRCz10/danRer10
DCD010148DT: PDF GRCz10/danRer10
DCD010149DT: BEDGRAPH GRCz10/danRer10
DCD010150DT: LOG GRCz10/danRer10
DCD010151DT: PDF GRCz10/danRer10
DCD010184DT: BAM GRCz10/danRer10
DCD013187DT: LOG GRCz11/danRer11
DCD013188DT: TSV GRCz11/danRer11
DCD013189DT: TSV GRCz11/danRer11
DCD013190DT: BEDGRAPH GRCz11/danRer11
DCD013191DT: BEDGRAPH GRCz11/danRer11
DCD013192DT: BIGWIG GRCz11/danRer11
DCD013193DT: PDF GRCz11/danRer11
DCD013194DT: LOG GRCz11/danRer11
DCD013195DT: PDF GRCz11/danRer11
DCD013196DT: LOG GRCz11/danRer11
DCD013200DT: BAM GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay
DCD002134AA DCD013725BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Sequencing Date
DCD002510SQ DCD002536TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008062DT: FASTQ
DCD008856DT: BIGWIG GRCz10/danRer10
DCD009276DT: TSV GRCz10/danRer10
DCD009277DT: LOG GRCz10/danRer10
DCD009278DT: TSV GRCz10/danRer10
DCD009279DT: BEDGRAPH GRCz10/danRer10
DCD009280DT: BEDGRAPH GRCz10/danRer10
DCD009281DT: BEDGRAPH GRCz10/danRer10
DCD009282DT: PDF GRCz10/danRer10
DCD009283DT: BEDGRAPH GRCz10/danRer10
DCD009284DT: LOG GRCz10/danRer10
DCD009285DT: PDF GRCz10/danRer10
DCD009286DT: LOG GRCz10/danRer10
DCD009328DT: BAM GRCz10/danRer10
DCD013198DT: LOG GRCz11/danRer11
DCD013201DT: TSV GRCz11/danRer11
DCD013202DT: TSV GRCz11/danRer11
DCD013203DT: BIGWIG GRCz11/danRer11
DCD013204DT: PDF GRCz11/danRer11
DCD013205DT: BEDGRAPH GRCz11/danRer11
DCD013206DT: LOG GRCz11/danRer11
DCD013207DT: PDF GRCz11/danRer11
DCD013208DT: BEDGRAPH GRCz11/danRer11
DCD013209DT: LOG GRCz11/danRer11
DCD013269DT: BAM GRCz11/danRer11
Applied Assay ID Biosample Replicate Assay Controlled By
DCD002135AA DCD013726BR RNA-seq_Peers_Lab_0005AS
Sequencing ID Technical Replicate Sequencing Lab Platform Instrument Chemistry Version Paired End Strand Maximum Read Length Sequencing Date
DCD002511SQ DCD002537TR Peers Lab, University of Liege Illumina HiSeq 2000 Truseq unstranded 01/31/2017
DCD008063DT: FASTQ
DCD008852DT: BIGWIG GRCz10/danRer10
DCD009227DT: LOG GRCz10/danRer10
DCD009228DT: TSV GRCz10/danRer10
DCD009229DT: TSV GRCz10/danRer10
DCD009230DT: BEDGRAPH GRCz10/danRer10
DCD009231DT: BEDGRAPH GRCz10/danRer10
DCD009232DT: BEDGRAPH GRCz10/danRer10
DCD009233DT: BEDGRAPH GRCz10/danRer10
DCD009234DT: PDF GRCz10/danRer10
DCD009235DT: LOG GRCz10/danRer10
DCD009236DT: PDF GRCz10/danRer10
DCD009237DT: LOG GRCz10/danRer10
DCD009270DT: BAM GRCz10/danRer10
DCD013210DT: LOG GRCz11/danRer11
DCD013211DT: TSV GRCz11/danRer11
DCD013212DT: TSV GRCz11/danRer11
DCD013213DT: BEDGRAPH GRCz11/danRer11
DCD013214DT: BEDGRAPH GRCz11/danRer11
DCD013215DT: PDF GRCz11/danRer11
DCD013216DT: BIGWIG GRCz11/danRer11
DCD013217DT: LOG GRCz11/danRer11
DCD013218DT: PDF GRCz11/danRer11
DCD013219DT: LOG GRCz11/danRer11
DCD013268DT: BAM GRCz11/danRer11